At the end of 1998 and the beginning of 1999, the golden mussel Limnoperna fortunei (Dunker, 1857), Mytilidae, originating from Southeast Asia, was registered for the first time in the Guaíba Lake Basin, Rio Grande do Sul State, Brazil. Quantitative samples were taken since the first register and for two years at various localities in the Jacuí Delta, northern limit of Guaíba Lake, and in the south limit of the later where it empties into Patos Lagoon. Samplings in Patos Lagoon revealed the presence of L. fortunei in October 2000 at Arambaré (30º54'S, 51º30'W) and in January 2001 at São Lourenço do Sul (31º20'S, 51º58'W). Quantitative samplings on roots of water hyacinths Eichhornia azurea (Sw.) Kunth and E. crassipes (Mart.) Solms-Laubach, on rhizomes of rushes Scirpus californicus (C.A. Mey.) Steud. and on trunks of Cephalanthus glabratus (Spreng.) K. Schum, were made in Jacuí Delta and on the beaches of Vila de Itapuã and Pombas camping area, in the Municipality of Viamão. Limnoperna fortunei encreased in number to a maximum density of 27,275 individuals/m² one year and five months after the first register and 62,100 individuals/m² two years later. In November 2000, i.e., two years after the appearance of the species in Guaíba Lake, it was recorded the first macrofouling in the pipes catching water for the city of Porto Alegre and in filters and pipelines of the cellulose industry Riocell-Klabin, Municipality of Guaíba (30º06'S, 51º20'W). Limnoperna fortunei preferentially occur on rhizomes of rushes, initially forming flat clusters that grow to large mass. It also fix on the shells and soft parts of native bivalves and on shells and operculum of gastropods, prevening full closure of these mollusks. The recent decrease of rushy areas on the shores of Guaíba Lake is attributed to invasion of L. fortunei

Background: Supernumerary ORFan genes (i.e., open reading frames without obvious homology to other genes) are present in the mitochondrial genomes of gonochoric freshwater mussels (Bivalvia: Unionida) showing doubly uniparental inheritance (DUI) of mitochondria. DUI is a system in which distinct female-transmitted and male-transmitted mitotypes coexist in a single species. In families Unionidae and Margaritiferidae, the transition from dioecy to hermaphroditism and the loss of DUI appear to be linked, and this event seems to affect the integrity of the ORFan genes. These observations led to the hypothesis that the ORFans have a role in DUI and/or sex determination. Complete mitochondrial genome sequences are however scarce for most families of freshwater mussels, therefore hindering a clear localization of DUI in the various lineages and a comprehensive understanding of the influence of the ORFans on DUI and sexual systems. Therefore, we sequenced and characterized eleven new mitogenomes from poorly sampled freshwater mussel families to gather information on the evolution and variability of the ORFan genes and their protein products. Results: We obtained ten complete plus one almost complete mitogenome sequence from ten representative species (gonochoric and hermaphroditic) of families Margaritiferidae, Hyriidae, Mulleriidae, and Iridinidae. ORFan genes are present only in DUI species from Margaritiferidae and Hyriidae, while non-DUI species from Hyriidae, Iridinidae, and Mulleriidae lack them completely, independently of their sexual system. Comparisons among the proteins translated from the newly characterized ORFans and already known ones provide evidence of conserved structures, as well as family-specific features. Conclusions: The ORFan proteins show a comparable organization of secondary structures among different families of freshwater mussels, which supports a conserved physiological role, but also have distinctive family-specific features. Given this latter observation and the fact that the ORFans can be either highly mutated or completely absent in species that secondarily lost DUI depending on their respective family, we hypothesize that some aspects of the connection among ORFans, sexual systems, and DUI may differ in the various lineages of unionids.