José Guadalupe García

José Guadalupe García


Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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28 January 2021 in Animals
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Jorge HidalgoJorge Hidalgo
Jorge Hidalgo
ACAlberto Cesarani
Alberto Cesarani
AGAndre Luiz Seccatto Garcia
Andre Luiz Seccatto Garcia
PSPattarapol Sumreddee
Pattarapol Sumreddee
NLNeon Larios
Neon Larios
RRRodolfo Ramírez
Rodolfo Ramírez
The ultimate goal of genetic selection is to improve genetic progress by increasing favorable alleles in the population. However, with selection, homozygosity, and potentially harmful recessive alleles can accumulate, deteriorating genetic variability and hampering continued genetic progress. Such potential adverse side effects of selection are of particular interest in populations with a small effective population size like the Romosinuano beef cattle in Mexico. The objective of this study was to evaluate the genetic background and inbreeding depression in Mexican Romosinuano cattle using pedigree and genomic information. Inbreeding was estimated using pedigree (FPED) and genomic information based on the genomic relationship matrix (FGRM) and runs of homozygosity (FROH) of different length classes. Linkage disequilibrium (LD) was evaluated using the correlation between pairs of loci, and the effective population size (Ne) was calculated based on LD and pedigree information. The pedigree file consisted of 4875 animals born between 1950 and 2019, of which 71 had genotypes. LD decreased with the increase in distance between markers, and Ne estimated using genomic information decreased from 610 to 72 animals (from 109 to 1 generation ago), the Ne estimated using pedigree information was 86.44. The reduction in effective population size implies the existence of genetic bottlenecks and the decline of genetic diversity due to the intensive use of few individuals as parents of the next generations. The number of runs of homozygosity per animal ranged between 18 and 102 segments with an average of 55. The shortest and longest segments were 1.0 and 36.0 Mb long, respectively, reflecting ancient and recent inbreeding. The average inbreeding was 2.98 ± 2.81, 2.98 ± 4.01, and 7.28 ± 3.68% for FPED, FGRM, and FROH, respectively. The correlation between FPED and FGRM was −0.25, and the correlations among FPED and FROH of different length classes were low (from 0.16 to 0.31). The correlations between FGRM and FROH of different length classes were moderate (from 0.44 to 0.58), indicating better agreement. A 1% increase in population inbreeding decreased birth weight by 0.103 kg and weaning weight by 0.685 kg. A strategy such as optimum genetic contributions to maximize selection response and manage the long-term genetic variability and inbreeding could lead to more sustainable breeding programs for the Mexican Romosinuano beef cattle breed.

31 January 2020 in Revista Colombiana de Ciencias Pecuarias
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RNRafael Núñez-Domínguez
Rafael Núñez-Domínguez
RMRicardo Martinez-Rocha
Ricardo Martinez-Rocha
Jorge HidalgoJorge Hidalgo
Jorge Hidalgo
RRRodolfo Ramírez
Rodolfo Ramírez
JGJosé Guadalupe García
José Guadalupe García
Background: Romosinuano cattle breed in Mexico has endured isolation and it is necessary to characterize it in order to facilitate sustainable genetic management. Objective: To assess the evolution of the structure and genetic diversity of the Romosinuano breed in Mexico, through pedigree analysis. Methods: Pedigree data was obtained from Asociación Mexicana de Criadores de Ganado Romosinuano y Lechero Tropical (AMCROLET). The ENDOG program (4.8 version) was used to analyze two datasets, one that includes upgrading from F1 animals (UP) and the other with only straight-bred cattle (SP). For both datasets, three reference populations were defined: 1998-2003 (RP1), 2004-2009 (RP2), and 2010-2017 (RP3). The pedigree included 3,432 animals in UP and 1,518 in SP. Demographic parameters were: Generation interval (GI), equivalent number of generations (EG), pedigree completeness index (PCI), and gene flow among herds. Genetic parameters were: Inbreeding (F) and average relatedness (AR) coefficients, effective population size (Nec), effective number of founders and ancestors, and number of founder genome equivalents. Results: The GI varied from 6.10 to 6.54 for UP, and from 6.47 to 7.16 yr for SP. The EG of the UP and SP improved >63% from RP1 to RP3. The PCI increased over time. No nucleus or isolated herds were found. For RP3, F and AR reached 2.08 and 5.12% in the UP, and 2.55 and 5.94% in the SP. For RP3, Nec was 57 in the UP and 45 in the SP. Genetic diversity losses were attributed mainly (>66%) to genetic drift, except for RP3 in the SP (44%). Conclusions: A reduction of the genetic diversity has been occurring after the Romosinuano breed association was established in Mexico, and this is mainly due to random loss of genes.Keywords: effective population size; gene flow; genetic diversity; genetic drift; generation interval; inbreeding; pedigree; population structure; probability of gene origin; Romosinuano cattle. Resumen Antecedentes: La raza bovina Romosinuano ha estado prácticamente aislada en México y requiere ser caracterizada para un manejo genético sostenible. Objetivo: Evaluar la evolución de la estructura y diversidad genética de la raza Romosinuano en México, mediante el análisis del pedigrí. Métodos: Los datos genealógicos provinieron de la Asociación Mexicana de Criadores de Ganado Romosinuano y Lechero Tropical (AMCROLET). Los análisis se realizaron con el programa ENDOG (versión 4.8) para dos bases de datos, una que incluyó animales en cruzamiento absorbente (UP) a partir de F1 y la otra con sólo animales puros (SP). Para ambas bases de datos se definieron tres poblaciones de referencia: 1998-2003 (RP1), 2004- 2009 (RP2), y 2010-2017 (RP3). El pedigrí incluyó 3.432 animales en la UP y 1.518 en la SP. Los parámetros demográficos fueron: intervalo generacional (GI), número de generaciones equivalentes (EG), índice de completitud del pedigrí (PCI), y flujo de genes entre hatos. Los parámetros genéticos fueron: coeficientes de consanguinidad (F) y de relación genética aditiva (AR), tamaño efectivo de la población (Nec), número efectivo de fundadores y ancestros, y número equivalente de genomas fundadores. Resultados: El GI varió de 6,10 a 6,54 para la UP, y de 6,47 a 7,16 años para la SP. El EG de la UP y la SP mejoró >63%, de RP1 a RP3. El PCI aumentó a través de los años, pero más para la SP que para la UP. No se encontraron hatos núcleo o aislados. Para RP3, F y AR alcanzaron 2,08 y 5,12% en la UP, y 2,55 y 5,94% en la SP. Para RP3, Nec fue 57 en la UP y 45 en la SP. Más de 66% de las pérdidas en diversidad genética se debieron a deriva genética, excepto para RP3 en la UP (44%). Conclusiones: una reducción de la diversidad genética ha estado ocurriendo después de que se formó la asociación de criadores de ganado Romosinuano en México, y es debida principalmente a pérdidas aleatorias de genes.Palabras clave: consanguinidad; deriva genética; diversidad genética; estructura poblacional; flujo de genes; ganado Romosinuano; intervalo generacional; pedigrí; probabilidad de origen del gen; tamaño efectivo de población. Resumo Antecedentes: A raça bovina Romosinuano tem estado praticamente isolada no México e precisa ser caracterizada para um manejo genético sustentável. Objetivo: Avaliar a evolução da estrutura e diversidade genética da raça Romosinuano no México, através da análise de pedigree. Métodos: Os dados genealógicos vieram da Asociación Mexicana de Criadores de Ganado Romosinuano y Lechero Tropical (AMCROLET). As análises foram feitas com o programa ENDOG (versão 4.8) para duas bases de dados, uma que incluiu animais em cruzamento absorvente (UP) a partir da F1 e a outra base de dados somente com animais puros (SP). Para ambas bases de dados foram definidas três populações de referência: 1998-2003 (RP1), 2004-2009 (RP2) e 2010-2017 (RP3). O pedigree incluiu 3.432 animais na UP e 1.518 na SP. Os parâmetros demográficos foram: intervalo entre gerações (GI), número de gerações equivalentes (EG), índice de completude do pedigree (PCI), e fluxo de genes entre rebanhos. Os parâmetros genéticos foram: coeficiente de consanguinidade (F) e da relação genética aditiva (AR), tamanho efetivo da população (Nec), número efetivo de fundadores e ancestrais, e número equivalente de genomas fundadores. Resultados: O GI variou de 6,10 a 6,54 para a UP, e de 6,47 a 7,16 anos para a SP. EG da UP e a SP melhorou >63%, de RP1 a RP3. O PCI aumentou ao longo dos anos, mas mais para a SP do que para o UP. Não se encontraram...

1 December 2010 in Animal Reproduction Science
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RLR. Rodríguez-De Lara
R. Rodríguez-De Lara
JNJ. Noguez-Estrada
J. Noguez-Estrada
RRR. Rangel-Santos
R. Rangel-Santos
JGJosé Guadalupe García
José Guadalupe García
PMP.A. Martínez-Hernández
P.A. Martínez-Hernández
EMEma Maldonado-Siman
Ema Maldonado-Siman

28 November 2022 in Life
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MGMaría Inés Sierra Galicia
María Inés Sierra Galicia
RLRaymundo Rodríguez De Lara
Raymundo Rodríguez De Lara
JOJosé Felipe Orzuna-Orzuna
José Felipe Orzuna-Orzuna
ALAlejandro Lara-Bueno
Alejandro Lara-Bueno
JGJosé Guadalupe García
José Guadalupe García
PHPedro Abel Hernández-García
Pedro Abel Hernández-García
The objective of this study was to evaluate the effect of supplementation with bee pollen (BP) and propolis (PRO) on productive performance, Eimeria oocyst counts in feces, blood metabolites, and the meat quality of growing rabbits. A total of 160 hybrid rabbits (California × New Zealand) of 30 days of age and 643 ± 8.0 g body weight (BW) were assigned to four treatments with 10 replicates each (four rabbits/replicate). The treatments were as follows: (1) CON: rabbits fed basal diet and not supplemented with BP or PRO; (2) BP500: CON + BP (500 mg/kg BW); (3) PRO50: CON + PRO (50 µL/kg BW); and (4) BP + PRO: CON + BP (500 mg/kg BW) + PRO (50 µL/kg BW). Higher daily weight gain (p = 0.04) and lower feed conversion rate (p = 0.03) were observed in rabbits supplemented with PRO50. In addition, supplementation with PRO50 and BP + PRO reduced the amount of Eimeria oocysts per gram of feces (p < 0.05). Most hematological and serum biochemical parameters were similar in rabbits of all treatments. Protein content, collagen, and meat color were similar between treatments. In conclusion, propolis supplementation (50 µL/kg BW) can prevent coccidiosis and act as a natural growth promoter in rabbits without affecting animal health and meat quality.

1 May 2007 in Animal Reproduction Science
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RLR. Rodríguez-De Lara
R. Rodríguez-De Lara
CHC.A. Herrera-Corredor
C.A. Herrera-Corredor
MFM. Fallas-López
M. Fallas-López
RRR. Rangel-Santos
R. Rangel-Santos
VMV. Mariscal-Aguayo
V. Mariscal-Aguayo
JGJosé Guadalupe García
José Guadalupe García

20 November 2020 in Revista MVZ Córdoba
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RMRicardo Martinez-Rocha
Ricardo Martinez-Rocha
RRRodolfo Ramírez
Rodolfo Ramírez
RNRafael Núñez-Domínguez
Rafael Núñez-Domínguez
JGJosé Guadalupe García
José Guadalupe García
Gaspar Manuel Parra-BracamonteGaspar Manuel Parra-Bracamonte
Gaspar Manuel Parra-Bracamonte
Objetivo. Caracterizar las curvas de crecimiento y el comportamiento reproductivo de vacas Romosinuano en México. Materiales y métodos. Se analizaron 928 registros de peso y edad de 127 hembras para características de crecimiento, y 459 registros de partos de 113 vacas para características reproductivas. Se ajustaron cuatro modelos no lineales mixtos para describir la curva de crecimiento, y se estimaron los indicadores de edad al 50% de madurez (E50M) y porcentaje de madurez a los 18 meses de edad (PM18). Para evaluar el comportamiento reproductivo se estimó la edad al primer parto (EPP), intervalo entre partos (IEP), y tasa de pariciones (TP). Resultados. El modelo de Brody fue el que mejor ajustó la curva de crecimiento. El parámetro A, que estima el peso maduro, osciló entre 430.2 y 466.2 kg; el b entre 0.94 y 5.45; y el k entre 0.001 y 0.002; dependiendo del modelo utilizado. La E50M varió entre 20 y 21 meses, y el PM18 entre 44.5 y 45.5%. Las medias de EPP, IEP, y TP a los 550 d fueron 1059±282 d, 553±68 d, y 74±19%, y mejorando (p<0.05) cuando las hembras presentan mayor porcentaje de su peso maduro, dependiendo de la época de parto. Conclusiones. El peso maduro estimado indica que el ganado Romosinuano puede considerarse como una raza de tamaño pequeño o mediano, con aceptable aptitud reproductiva. Las hembras con menor tamaño maduro estimado presentaron edades al primer parto más temprano que vacas más pesadas.