Yves Lussier

Prof. Dr. Yves Lussier

Associate Vice President for Data Science and Chief Knowledge Officer, University of Arizona Health Sciences; Director of the Center for Biomedical Informatics and Biostatistics and Associated Director for Precision Medicine Cancer Center and of the BIO5
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Research Focus & Metrics

Academic Career Length

39Years (1988-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 September 2004 in Journal of the American Medical Informatics Association
Verified
Journal Article
Open access
PDF file
CFCarol Friedman
Carol Friedman
LSLyudmila Shagina
Lyudmila Shagina
Yves LussierYves Lussier
Yves Lussier
GHGeorge Hripcsak
George Hripcsak
Objective: The aim of this study was to develop a method based on natural language processing (NLP) that automatically maps an entire clinical docume

1 January 2005 in Psychological Assessment
Verified
Journal Article
Closed access
SSStéphane Sabourin
Stéphane Sabourin
PVPierre Valois
Pierre Valois
Yves LussierYves Lussier
Yves Lussier
The main purpose of the current research was to develop an abbreviated form of the Dyadic Adjustment Scale (DAS) with nonparametric item response theory. The authors conducted 5 studies, with a total participation of 8,256 married or cohabiting individuals. Results showed that the item characteristic curves behaved in a monotonically increasing function for all items of the brief 4-item version of the DAS (DAS-4). The DAS-4 proved to be informative at all levels of couple satisfaction. Compared with the 32-item version of the DAS (DAS-32), it was as effective in predicting couple dissolution and was significantly less contaminated by socially desirable responding. In addition, structural equation modeling demonstrated that the underlying latent construct measured by the DAS-4 was very stable over a 2-year period. This brief version has the advantage of being less time consuming and constitutes a promising alternative to the original DAS-32 for clinicians and researchers.

2 October 2013 in Science Translational Medicine
Verified
Journal Article
Closed access
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JHJose D. Herazo-Maya
Jose D. Herazo-Maya
INImre Noth
Imre Noth
SDSteven R. Duncan
Steven R. Duncan
SKSungHwan Kim
SungHwan Kim
SMShwu-Fan Ma
Shwu-Fan Ma
NKNaftali Kaminski
Naftali Kaminski
Genome-scale transcriptomic profiling of peripheral blood mononuclear cells from patients with idiopathic pulmonary fibrosis reveals that decreased expression ofCD28,ICOS,LCK, andITKpredicts mortality.

1 January 2007 in Emerging Infectious Diseases
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Journal Article
Open access
GPGustavo Palacios
Gustavo Palacios
PQPhenix-Lan Quan
Phenix-Lan Quan
OJOmar J Jabado
Omar J Jabado
SCSean Conlan
Sean Conlan
DHDavid L Hirschberg
David L Hirschberg
ILIan Lipkin
Ian Lipkin
To facilitate rapid, unbiased, differential diagnosis of infectious diseases, we designed GreeneChipPm, a panmicrobial microarray comprising 29,455 sixty-mer oligonucleotide probes for vertebrate viruses, bacteria, fungi, and parasites. Methods for nucleic acid preparation, random primed PCR amplification, and labeling were optimized to allow the sensitivity required for application with nucleic acid extracted from clinical materials and cultured isolates. Analysis of nasopharyngeal aspirates, blood, urine, and tissue from persons with various infectious diseases confirmed the presence of viruses and bacteria identified by other methods, and implicated Plasmodium falciparum in an unexplained fatal case of hemorrhagic feverlike disease during the Marburg hemorrhagic fever outbreak in Angola in 2004–2005.

13 December 2011 in PLOS ONE
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Journal Article
Open access
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Yves LussierYves Lussier
Yves Lussier
HXH. Rosie Xing
H. Rosie Xing
JSJoseph K. Salama
Joseph K. Salama
NKNikolai N. Khodarev
Nikolai N. Khodarev
YHYong Huang
Yong Huang
RWRalph Weichselbaum
Ralph Weichselbaum
Cancer staging and treatment presumes a division into localized or metastatic disease. We proposed an intermediate state defined by ≤5 cumulative metastasis(es), termed oligometastases. In contrast to widespread polymetastases, oligometastatic patients may benefit from metastasis-directed local treatments. However, many patients who initially present with oligometastases progress to polymetastases. Predictors of progression could improve patient selection for metastasis-directed therapy. Here, we identified patterns of microRNA expression of tumor samples from oligometastatic patients treated with high-dose radiotherapy. Patients who failed to develop polymetastases are characterized by unique prioritized features of a microRNA classifier that includes the microRNA-200 family. We created an oligometastatic-polymetastatic xenograft model in which the patient-derived microRNAs discriminated between the two metastatic outcomes. MicroRNA-200c enhancement in an oligometastatic cell line resulted in polymetastatic progression. These results demonstrate a biological basis for oligometastases and a potential for using microRNA expression to identify patients most likely to remain oligometastatic after metastasis-directed treatment.

10 December 2012 in PLOS ONE
Verified
Journal Article
Open access
PDF file
Yves LussierYves Lussier
Yves Lussier
NKNikolai N. Khodarev
Nikolai N. Khodarev
KRKelly Regan
Kelly Regan
KCKimberly Corbin
Kimberly Corbin
HLHaiquan Li
Haiquan Li
RWRalph Weichselbaum
Ralph Weichselbaum
Strategies to stage and treat cancer rely on a presumption of either localized or widespread metastatic disease. An intermediate state of metastasis termed oligometastasis(es) characterized by limited progression has been proposed. Oligometastases are amenable to treatment by surgical resection or radiotherapy. We analyzed microRNA expression patterns from lung metastasis samples of patients with ≤5 initial metastases resected with curative intent. Patients were stratified into subgroups based on their rate of metastatic progression. We prioritized microRNAs between patients with the highest and lowest rates of recurrence. We designated these as high rate of progression (HRP) and low rate of progression (LRP); the latter group included patients with no recurrences. The prioritized microRNAs distinguished HRP from LRP and were associated with rate of metastatic progression and survival in an independent validation dataset. Oligo- and poly- metastasis are distinct entities at the clinical and molecular level.