Yulia Frank

Dr. Yulia Frank

Tomsk State University
orcid

Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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23 December 2020 in Sustainability
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YFYulia Frank
Yulia Frank
EVEgor Vorobiev
Egor Vorobiev
Danil VorobievDanil Vorobiev
Danil Vorobiev
ATAndrey A. Trifonov
Andrey A. Trifonov
DADmitry Victorovich Antsiferov
Dmitry Victorovich Antsiferov
Vladimir StrezovVladimir Strezov
Vladimir Strezov
To date, the largest Russian rivers discharging to the Arctic Ocean remain a “blank spot” on the world map of data on the distribution of microplastics in freshwater systems. This study characterizes the abundance and morphology of microplastics in surface water of the Ob River and its large tributary, the Tom River, in western Siberia. The average number of particles for the two rivers ranged from 44.2 to 51.2 items per m3 or from 79.4 to 87.5 μg per m3 in the Tom River and in the Ob River, respectively. Of the recovered microplastics, 93.5% were less than 1 mm in their largest dimension, the largest group (45.5% of total counts) consisted of particles with sizes range 0.30–1.00 mm. Generally, microfragments of irregular shape were the most abundant among the Ob and Tom samples (47.4%) and exceeded microfibers (22.1%), microfilms (20.8%), and microspheres (9.74%) by average counts. Results from this study provide a baseline for understanding the scale of the transport of microplastics by the Ob River system into the Arctic Ocean and add to currently available data on microplastics abundance and diversity in freshwater systems of differing global geographic locations.

19 December 2016 in Frontiers in Microbiology
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YFYulia Frank
Yulia Frank
VKVitaly V. Kadnikov
Vitaly V. Kadnikov
ALAnastasia P. Lukina
Anastasia P. Lukina
DBDavid Banks
David Banks
ABAlexey Beletsky
Alexey Beletsky
Nikolai RavinNikolai Ravin
Nikolai Ravin
Members of the genus Thermodesulfovibrio belong to the Nitrospirae phylum and all isolates characterized to date are neutrophiles. They have been isolated from terrestrial hot springs and thermophilic methanogenic anaerobic sludges. Their molecular signatures have, however, also been detected in deep subsurface. The purpose of this study was to characterize and analyze the genome of a newly isolated, moderately alkaliphilic Thermodesulfovibrio from a 2 km deep aquifer system in Western Siberia, Russia. The new isolate, designated N1, grows optimally at pH 8.5-9.0 and at 65 ºC. It is able to reduce sulfate, thiosulfate or sulfite with a limited range of electron donors such as formate, pyruvate and lactate. Analysis of the 1.93 Mb draft genome of strain N1 revealed that it contains a set of genes for dissimilatory sulfate reduction, including sulfate adenyltransferase, adenosine-5'-phosphosulfate reductase AprAB, membrane-bound electron transfer complex QmoABC, dissimilatory sulfite reductase DsrABC and sulfite reductase-associated electron transfer complex DsrMKJOP. Hydrogen turnover is enabled by soluble cytoplasmic, membrane-linked, and soluble periplasmic hydrogenases and a periplasmic formate dehydrogenase. The use of thiosulfate as an electron acceptor is enabled by a membrane-linked molybdopterin oxidoreductase. The N1 requirement for organic carbon sources corresponds to the lack of the autotrophic C1-fixation pathways. Comparative analysis of the genomes of Thermodesulfovibrio (T. yellowstonii, T. islandicus, T. аggregans, T. thiophilus, and strain N1) revealed a low overall genetic diversity and several adaptive traits. Consistent with an alkaliphilic lifestyle, a multisubunit Na+/H+ antiporter of the Mnh family is encoded in the Thermodesulfovibrio strain N1 genome. Nitrogenase genes were found in T. yellowstonii, T. aggregans, and T. islandicus, nitrate reductase in T. islandicus, and cellulose synthetase in T. aggregans and strain N1. Overall, our results provide genomic insights into metabolism of the Thermodesulfovibrio lineage in microbial communities of the deep subsurface biosphere

23 May 2016 in FEMS Microbiology Ecology
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AMAndrey Mardanov
Andrey Mardanov
IPInna A Panova
Inna A Panova
ABAlexey Beletsky
Alexey Beletsky
MAMarat R Avakyan
Marat R Avakyan
VKVitaly V Kadnikov
Vitaly V Kadnikov
OKOlga Karnachuk
Olga Karnachuk
Microbial sulfate reduction in acid mine drainage is still considered to be confined to anoxic conditions, although several reports have shown that sulfate-reducing bacteria (SRB) occur under microaerophilic or aerobic conditions. We have measured sulfate reduction rates of up to 60 nmol S cm−3day−1 in oxidized layers of gold mine tailings in Kuzbass (SW Siberia). A novel, acidophilic, copper-tolerant Desulfosporosinus sp. I2 was isolated from the same sample and its genome was sequenced. The genomic analysis and physiological data indicate the involvement of transporters and additional mechanisms to tolerate metals, such as sequestration by polyphosphates. Desulfosporinus sp. I2 encodes systems for a metabolically versatile life style. The genome possessed a complete Embden-Meyerhof pathway for glycolysis and gluconeogenesis. Complete oxidation of organic substrates could be enabled by the complete TCA cycle. Genomic analysis found all major components of the electron transfer chain necessary for energy generation via oxidative phosphorylation. Autotrophic CO2 fixation could be performed through the Wood-Ljungdahl pathway. Multiple oxygen detoxification systems were identified in the genome. Taking into account the metabolic activity and genomic analysis, the traits of the novel isolate broaden our understanding of active sulfate reduction and associated metabolism beyond strictly anaerobic niches.

15 November 2024 in Atmosphere
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ARAlexey Rednikin
Alexey Rednikin
YFYulia Frank
Yulia Frank
Artem Olegovich RozhinArtem Olegovich Rozhin
Artem Olegovich Rozhin
Danil VorobievDanil Vorobiev
Danil Vorobiev
Rawil FakhrullinRawil Fakhrullin
Rawil Fakhrullin
Airborne microplastics are emerging pollutants originating from disposable tableware, packaging materials, textiles, and other consumer goods. Microplastics vary in shape and size and exposed to external factors break down into even smaller fractions. Airborne microplastics are abundant in both urban and natural environments, including water bodies and glaciers, as particles can travel long distances. The potential toxicity of airborne microplastics cannot be underestimated. Microparticles, especially those < 10 µm, entering the human body through inhalation or ingestion have been shown to cause serious adverse health effects, such as chronic inflammation, oxidation stress, physical damage to tissues, etc. Microplastics adsorb toxic chemicals and biopolymers, forming a polymer corona on their surface, affecting their overall toxicity. In addition, microplastics can also affect carbon dynamics in ecosystems and have a serious impact on biochemical cycles. The approaches to improve sampling techniques and develop standardized methods to assess airborne microplastics are still far from being perfect. The mechanisms of microplastic intracellular and tissue transport are still not clear, and the impact of airborne microplastics on human health is not understood well. Reduced consumption followed by collection, reuse, and recycling of microplastics can contribute to solving the microplastic problem. Combinations of different filtration techniques and membrane bioreactors can be used to optimize the removal of microplastic contaminants from wastewater. In this review we critically summarize the existing body of literature on airborne microplastics, including their distribution, identification, and safety assessment.

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YFYulia Frank
Yulia Frank
EIElena Interesova
Elena Interesova
Mikhail SolovyevMikhail Solovyev
Mikhail Solovyev
JXJiayi Xu
Jiayi Xu
Danil VorobievDanil Vorobiev
Danil Vorobiev
Microplastics (MPs) are emergent pollutants in freshwater environments and may impact aquatic organisms, including those of nutritional value. The specific activities of digestive and antioxidant enzymes can be used as good bioindicators of the potential effects of MPs on fish in case of waterborne MP contamination. In this study, we used fluorescent polystyrene microplastics (PS-MPs) to analyze the alterations in enzyme activities in larvae of Coregonus peled Gmelin (peled or Northern whitefish), one of the most valuable commercial fish species of Siberia. Our results indicate that peled larvae can ingest 2 µm PS microspheres in a waterborne exposure model. A positive correlation (rs = 0.956; p < 0.01) was found between MP concentration in water and the number of PS microspheres in fish guts, with no significant differences between 24 h and 6-day exposure groups. The ingestion of MPs caused alterations in digestive enzyme activity and antioxidant responses at the whole-body level. The presence of PS-MPs significantly stimulated (p < 0.05) the specific activity of α-Amylase and non-specific esterases in peled larvae after 24 h. However, a pronounced positive effect (p < 0.05) of MPs on the activity of pancreatic trypsine and bile salt-activated lipase was only found after 6 days of exposure compared to after 24 h. Intestinal membrane enzyme aminopeptidase N was also stimulated in the presence of PS-MPs after 6-day exposure. We also observed a significant increase in the specific activity of catalase in peled larvae after 6 days of exposure, which indicates the MP-induced modulation of oxidative stress. Taken together, these results highlight the potential impact of environmental MPs on northern commercial fish, their importance for estimating fish stocks, and the sustainability of freshwater ecosystems.

16 November 2021 in Water
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YFYulia Frank
Yulia Frank
Danil VorobievDanil Vorobiev
Danil Vorobiev
OKOlga A. Kayler
Olga A. Kayler
EVEgor Vorobiev
Egor Vorobiev
KKKsenia S. Kulinicheva
Ksenia S. Kulinicheva
Tina Hunter SolimanTina Hunter Soliman
Tina Hunter Soliman
This study is a pioneering attempt to count microplastics (MPs) in the Yenisei River system to clarify the role of Siberian Rivers in the transport of MPs to the Arctic Ocean. The average MPs content in the surface water of the Yenisei large tributary, the Nizhnyaya Tunguska River, varied from 1.20 ± 0.70 to 4.53 ± 2.04 items/m3, tending to increase along the watercourse (p < 0.05). Concentrations of MPs in bottom sediments of the two rivers were 235 ± 83.0 to 543 ± 94.1 with no tendency of downstream increasing. Linear association (r = 0.952) between average organic matter content and average counts of MPs in bottom sediments occurred. Presumably MPs originated from the daily activities of the in-situ population. Further spatial-temporal studies are needed to estimate the riverine MPs fluxes into the Eurasian Arctic seas.