Ignazio Carbone

Dr. Ignazio Carbone


Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 December 2011 in Molecular Ecology
Verified
Journal Article
Closed access
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RORodrigo A. Olarte
Rodrigo A. Olarte
BHBruce W. Horn
Bruce W. Horn
JDJoe W. Dorner
Joe W. Dorner
JMJames T. Monacell
James T. Monacell
RSRakhi Singh
Rakhi Singh
ICIgnazio Carbone
Ignazio Carbone

1 August 2018 in Fungal Biology
Verified
Journal Article
Open access
CSCatalina Salgado-Salazar
Catalina Salgado-Salazar
LBLisa A. Beirn
Lisa A. Beirn
AIAdnan Ali Ismaiel
Adnan Ali Ismaiel
MBMichael J. Boehm
Michael J. Boehm
ICIgnazio Carbone
Ignazio Carbone
JCJo Anne Crouch
Jo Anne Crouch
Dollar spot is one of the most destructive and economically important fungal diseases of amenity turfgrasses. The causal agent was first described in 1937 as the ascomycete Sclerotinia homoeocarpa. However, the genus-level taxonomic placement of this fungus has been the subject of an ongoing debate for over 75 y. Existing morphological and rDNA sequence evidence indicates that this organism is more appropriately placed in the family Rutstroemiaceae rather than the Sclerotiniaceae. Here we use DNA sequence data from samples of the dollar spot fungus and other members of the Rutstroemiaceae (e.g. Rutstroemia, Lanzia, Lambertella) collected throughout the world to determine the generic identity of the turfgrass dollar spot pathogen. Phylogenetic evidence from three nucleotide sequence markers (CaM, ITS and Mcm7; 1810-bp) confirmed that S. homoeocarpa is not a species of Sclerotinia; nor is it a member of any known genus in the Rutstroemiaceae. These data support the establishment of a new genus, which we describe here as Clarireedia gen. nov. The type species for the genus, Clarireedia homoeocarpa comb. nov., is described to accommodate the dollar spot fungus, and a neotype is designated. Three new species in this clade, Clarireedia bennettii sp. nov., Clarireedia jacksonii sp. nov., and Clarireedia monteithiana sp. nov. that also cause dollar spot disease are described. Clarireedia homoeocarpa and C. bennettii occur primarily on Festuca rubra (C3 grass) hosts and appear to be restricted to the United Kingdom. Clarireedia jacksonii and C. monteithiana occur on a variety of C3 and C4 grass hosts, respectively, and appear to be globally distributed. This resolved taxonomy puts to rest a major controversy amongst plant pathologists and provides a foundation for better understanding the nature and biology of these destructive pathogens.

9 March 2021 in Communications Biology
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Journal Article
Open access
PDF file
SOShuzo Oita
Shuzo Oita
AIAlicia Ibáñez
Alicia Ibáñez
FLFrançois Lutzoni
François Lutzoni
JMJolanta Miadlikowska
Jolanta Miadlikowska
JGJózsef Geml
József Geml
EAElizabeth Arnold
Elizabeth Arnold
Understanding how species-rich communities persist is a foundational question in ecology. In tropical forests, tree diversity is structured by edaphic factors, climate, and biotic interactions, with seasonality playing an essential role at landscape scales: wetter and less seasonal forests typically harbor higher tree diversity than more seasonal forests. We posited that the abiotic factors shaping tree diversity extend to hyperdiverse symbionts in leaves—fungal endophytes—that influence plant health, function, and resilience to stress. Through surveys in forests across Panama that considered climate, seasonality, and covarying biotic factors, we demonstrate that endophyte richness varies negatively with temperature seasonality. Endophyte community structure and taxonomic composition reflect both temperature seasonality and climate (mean annual temperature and precipitation). Overall our findings highlight the vital role of climate-related factors in shaping the hyperdiversity of these important and little-known symbionts of the trees that, in turn, form the foundations of tropical forest biodiversity.

17 November 2009 in Molecular Ecology
Verified
Journal Article
Closed access
PDF file
Geromy G MooreGeromy G Moore
Geromy G Moore
RSRakhi Singh
Rakhi Singh
BHBruce W. Horn
Bruce W. Horn
ICIgnazio Carbone
Ignazio Carbone

6 September 2007 in Molecular Ecology
Verified
Journal Article
Closed access
PDF file
ICIgnazio Carbone
Ignazio Carbone
JJJudy L. Jakobek
Judy L. Jakobek
JRJorge Humberto Ramirez-Prado
Jorge Humberto Ramirez-Prado
BHBruce W. Horn
Bruce W. Horn

18 July 2019 in Microbiology Resource Announcements
Verified
Journal Article
Open access
ICIgnazio Carbone
Ignazio Carbone
JWJames B. White
James B. White
JMJolanta Miadlikowska
Jolanta Miadlikowska
AAA. Elizabeth Arnold
A. Elizabeth Arnold
MMMark A. Miller
Mark A. Miller
FLFrançois Lutzoni
François Lutzoni
The Tree-Based Alignment Selector (T-BAS) toolkit combines phylogenetic-based placement of DNA sequences with alignment and specimen metadata visualization tools in an integrative pipeline for analyzing microbial biodiversity. The release of T-BAS version 2.1 makes available reference phylogenies, supports multilocus sequence placements and permits uploading and downloading trees, alignments, and specimen metadata.