The current coronavirus disease 2019 (COVID-19) pandemic is largely driven by community transmission, after 2019 novel Coronavirus (2019-nCoV or SARS-CoV-2) crosses the borders. To stop the spread, rapid testing is required at community clinics and hospitals. These rapid tests should be comparable with the standard PCR technology. Isothermal amplification technology provides an excellent alternative that is highly amenable to resource limited settings, where expertise and infrastructure to support PCR are not available. In this review, we provide a brief description of isothermal amplification technology, its potential and the gaps that need to be considered for SARS-CoV-2 detection. Among this emerging technology, loop-mediated amplification (LAMP), recombinase polymerase amplification (RPA) and Nicking enzyme-assisted reaction (NEAR) technologies have been identified as potential platforms that could be implemented at community level, without samples referral to a centralized laboratory and prolonged turnaround time associated with the standard COVID-19 RT-PCR test. LAMP, for example, has recently been shown to be comparable with PCR and could be performed in less than 30 min by non-laboratory staff, without RNA extractions commonly associated with PCR. Interestingly, NEAR (ID NOW™ COVID-19 (Abbott, IL, USA) was able to detect the virus in 5 min. More so, isothermal platforms are cost effective and could easily be scaled up to resource limited settings. Diagnostics developers, scientific community and commercial companies could consider this alternative method to help stop the spread of COVID-19.

The effect of lameness on the fertility of dairy cattle is well recognized. But, the effect of lameness on the fertility of seasonally breeding cattle in pasture-based systems is less well characterized. This prospective cohort study of 463 cows on 1 farm in the lower North Island of New Zealand was designed to assess the effect of clinical lameness, as identified by farm staff, on the hazard of conception after the planned start-of-mating date. A Cox proportional hazards model with time-varying covariates was used. After controlling for the effect of parity, breed, body weight at calving, and calving-to-planned start of mating interval, the daily hazard of conception for cows identified as lame was 0.78 (95% confidence interval: 0.68-0.86) compared with non-lame cows. Lame cows took 12 d longer to get pregnant compared with their non-lame counterparts.

Daily walkover liveweight (WoLW) records (n=79,697) from 463 pasture-fed dairy cows from a single dairy herd in the lower North Island of New Zealand were recorded over the first 100 d of lactation. The aims of this study were to (1) describe LW records retrieved by a standalone automatic Wo daily weighing system; (2) describe the frequency and nature of outlier LW records measured by the system and develop an approach for excluding identified outlier LW records; (3) quantify the agreement between cow LW measured using the Wo system and those measured statically; and (4) describe the autocorrelation between daily LW measurements to provide an indication of how frequently management decisions need to be reviewed to effectively monitor cow LW change in the early-lactation period. The standard deviation of daily LW measurements across parities was 17 kg, on average. A near perfect association between LW measured statically and WoLW (concordance correlation coefficient 0.99, 95% CI 0.99-1.0) was observed. After controlling for the effect of LW at calving and long-term LW change using a mixed-effects linear regression model, the autocorrelation between WoLW recorded on successive days was 0.21, decaying to zero by 8 d. This study shows that by using a standalone automatic Wo weighing system positioned in the exit race of a rotary milking parlor, it was possible to record LW of individual cows on a daily basis and, with controlled cow flow over the weighing platform (allowing for sufficient succession distance to prevent congestion), results were similar to those recorded using conventional, static weighing techniques using the same scales. Based on the autocorrelation analyses, we recommend that LW are recorded on a daily basis to allow changes in physiological status such as the onset of acute illness or estrus to be detected. For managerial purposes, such as using LW change as a guide for adjusting the herd feeding program, we recommend a 7-d decision interval to effectively monitor significant changes in cows' recorded daily LW measurements.

Mastitis is the most common disease in dairy cattle worldwide. The objectives of this study were to estimate the prevalence of different bacterial species associated with mastitis from dairy herds located in geographically and climatically distinct zones in Australia, and to evaluate the antimicrobial susceptibility of the isolated bacteria. Quarter-level milk samples (n = 419) were collected from 151 mastitis cases and 268 healthy controls originating from 18 dairy herds located in tropical (Northern Queensland), subtropical (Southeast Queensland) and temperate zones (Victoria) between March and June 2019. Milk samples were cultured, and the isolated bacteria were grouped into six groups: Enterobacteriaceae spp.; Streptococcus spp.; Staphylococcus aureus, non-aureus staphylococci (NAS); Bacillus spp.; and Others. Mixed effects conditional logistic regression models were applied to quantify the association between the prevalence of each bacterial group and the herd zone and bulk milk tank somatic cell counts (BMTSCC). Of the 205 isolates, 102 (50%) originated from mastitis cases, and 103 (50%) from controls. Staphylococci were the most prevalent (NAS 32% and S. aureus 11%). Contagious mastitis bacteria were more prevalent in Victoria compared to Queensland dairy herds. NAS species (P < 0.001) were less prevalent in herds with BMTSCC >300,000 cells/mL compared with herds with low BMTSCC ≤150,000 cells/mL. Enterobacteriaceae and Streptococcus spp. groups showed high resistance rates to 1 (51 and 47%, respectively), and 2 (11 and 23%, respectively), antimicrobials. More than one third of the Enterobacteriaceae (48%) and Others (43%) groups spp. were resistant to at least three antimicrobials. This study provided a unique opportunity to investigate the prevalence of mastitis-associated bacteria in clinical cases and in apparently healthy controls. The findings of this study help inform mastitis control and antimicrobial stewardship programs aimed to reduce the prevalence of mastitis and antimicrobial resistance in dairy herds.