Junyuan Shang

Ms. Junyuan Shang


Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 July 2020 in Computers in Biology and Medicine
Verified
Journal Article
Closed access
SHShenda Hong
Shenda Hong
YZYuxi Zhou
Yuxi Zhou
JSJunyuan Shang
Junyuan Shang
CXCao Xiao
Cao Xiao
JSJimeng Sun
Jimeng Sun

17 July 2019 in Proceedings of the AAAI Conference on Artificial Intelligence
Verified
Journal Article
Open access
PDF file
JSJunyuan Shang
Junyuan Shang
CXCao Xiao
Cao Xiao
TMTengfei Ma
Tengfei Ma
HLHongyan Li
Hongyan Li
JSJimeng Sun
Jimeng Sun
Recent progress in deep learning is revolutionizing the healthcare domain including providing solutions to medication recommendations, especially recommending medication combination for patients with complex health conditions. Existing approaches either do not customize based on patient health history, or ignore existing knowledge on drug-drug interactions (DDI) that might lead to adverse outcomes. To fill this gap, we propose the Graph Augmented Memory Networks (GAMENet), which integrates the drug-drug interactions knowledge graph by a memory module implemented as a graph convolutional networks, and models longitudinal patient records as the query. It is trained end-to-end to provide safe and personalized recommendation of medication combination. We demonstrate the effectiveness and safety of GAMENet by comparing with several state-of-the-art methods on real EHR data. GAMENet outperformed all baselines in all effectiveness measures, and also achieved 3.60% DDI rate reduction from existing EHR data.

19 December 2020 in Sensors
Verified
Journal Article
Open access
PDF file
YZYuxi Zhou
Yuxi Zhou
SHShenda Hong
Shenda Hong
JSJunyuan Shang
Junyuan Shang
MWMeng Wu
Meng Wu
QWQingyun Wang
Qingyun Wang
JXJunqing Xie
Junqing Xie
Assessing the health condition has a wide range of applications in healthcare, military, aerospace, and industrial fields. Nevertheless, traditional feature-engineered techniques involve manual feature extraction, which are too cumbersome to adapt to the changes caused by the development of sensor network technology. Recently, deep-learning-based methods have achieved initial success in health-condition assessment research, but insufficient considerations for problems such as class skewness, noisy segments, and result interpretability make it difficult to apply them to real-world applications. In this paper, we propose a K-margin-based Interpretable Learning approach for health-condition assessment. In detail, a skewness-aware RCR-Net model is employed to handle problems of class skewness. Furthermore, we present a diagnosis model based on K-margin to automatically handle noisy segments by naturally exploiting expected consistency among the segments associated with each record. Additionally, a knowledge-directed interpretation method is presented to learn domain knowledge-level features automatically without the help of human experts which can be used as an interpretable decision-making basis. Finally, through experimental validation in the field of both medical and aerospace, the proposed method has a better generality and high efficiency with 0.7974 and 0.8005 F1 scores, which outperform all state-of-the-art deep learning methods for health-condition assessment task by 3.30% and 2.99%, respectively.

7 March 2019 in arXiv
Verified
Preprint
Open access
PDF file
JSJunyuan Shang
Junyuan Shang
CXCao Xiao
Cao Xiao
TMTengfei Ma
Tengfei Ma
HLHongyan Li
Hongyan Li
JSJimeng Sun
Jimeng Sun
Recent progress in deep learning is revolutionizing the healthcare domain including providing solutions to medication recommendations, especially recommending medication combination for patients with complex health conditions. Existing approaches either do not customize based on patient health history, or ignore existing knowledge on drug-drug interactions (DDI) that might lead to adverse outcomes. To fill this gap, we propose the Graph Augmented Memory Networks (GAMENet), which integrates the drug-drug interactions knowledge graph by a memory module implemented as a graph convolutional networks, and models longitudinal patient records as the query. It is trained end-to-end to provide safe and personalized recommendation of medication combination. We demonstrate the effectiveness and safety of GAMENet by comparing with several state-of-the-art methods on real EHR data. GAMENet outperformed all baselines in all effectiveness measures, and also achieved 3.60% DDI rate reduction from existing EHR data.

30 April 2020 in arXiv
Verified
Preprint
Open access
PDF file
SHShenda Hong
Shenda Hong
YZYuxi Zhou
Yuxi Zhou
JSJunyuan Shang
Junyuan Shang
CXCao Xiao
Cao Xiao
JSJimeng Sun
Jimeng Sun
Background:The electrocardiogram (ECG) is one of the most commonly used diagnostic tools in medicine and healthcare. Deep learning methods have achieved promising results on predictive healthcare tasks using ECG signals. Objective:This paper presents a systematic review of deep learning methods for ECG data from both modeling and application perspectives. Methods:We extracted papers that applied deep learning (deep neural network) models to ECG data that were published between Jan. 1st of 2010 and Feb. 29th of 2020 from Google Scholar, PubMed, and the DBLP. We then analyzed each article according to three factors: tasks, models, and data. Finally, we discuss open challenges and unsolved problems in this area. Results: The total number of papers extracted was 191. Among these papers, 108 were published after 2019. Different deep learning architectures have been used in various ECG analytics tasks, such as disease detection/classification, annotation/localization, sleep staging, biometric human identification, and denoising. Conclusion: The number of works on deep learning for ECG data has grown explosively in recent years. Such works have achieved accuracy comparable to that of traditional feature-based approaches and ensembles of multiple approaches can achieve even better results. Specifically, we found that a hybrid architecture of a convolutional neural network and recurrent neural network ensemble using expert features yields the best results. However, there are some new challenges and problems related to interpretability, scalability, and efficiency that must be addressed. Furthermore, it is also worth investigating new applications from the perspectives of datasets and methods. Significance: This paper summarizes existing deep learning research using ECG data from multiple perspectives and highlights existing challenges and problems to identify potential future research directions.