Alessio Branchini

Dr. Alessio Branchini

Department of Life Sciences and Biotechnology, University of Ferrara, 44121 Ferrara, Italy
orcid

Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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26 September 2014 in PLOS ONE
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AVAlberta Vandini
Alberta Vandini
RTRobin Temmerman
Robin Temmerman
AFAlessia Frabetti
Alessia Frabetti
Elisabetta CaselliElisabetta Caselli
Elisabetta Caselli
PAPaola Antonioli
Paola Antonioli
SMSANTE MAZZACANE
SANTE MAZZACANE
Healthcare-Associated Infections (HAIs) are one of the most frequent complications occurring in healthcare facilities. Contaminated environmental surfaces provide an important potential source for transmission of many healthcare-associated pathogens, thus indicating the need for new and sustainable strategies. This study aims to evaluate the effect of a novel cleaning procedure based on the mechanism of biocontrol, on the presence and survival of several microorganisms responsible for HAIs (i.e. coliforms, Staphyloccus aureus, Clostridium difficile, and Candida albicans) on hard surfaces in a hospital setting. The effect of microbial cleaning, containing spores of food grade Bacillus subtilis, Bacillus pumilus and Bacillus megaterium, in comparison with conventional cleaning protocols, was evaluated for 24 weeks in three independent hospitals (one in Belgium and two in Italy) and approximately 20000 microbial surface samples were collected. Microbial cleaning, as part of the daily cleaning protocol, resulted in a reduction of HAI-related pathogens by 50 to 89%. This effect was achieved after 3–4 weeks and the reduction in the pathogen load was stable over time. Moreover, by using microbial or conventional cleaning alternatively, we found that this effect was directly related to the new procedure, as indicated by the raise in CFU/m2 when microbial cleaning was replaced by the conventional procedure. Although many questions remain regarding the actual mechanisms involved, this study demonstrates that microbial cleaning is a more effective and sustainable alternative to chemical cleaning and non-specific disinfection in healthcare facilities. This study indicates microbial cleaning as an effective strategy in continuously lowering the number of HAI-related microorganisms on surfaces. The first indications on the actual level of HAIs in the trial hospitals monitored on a continuous basis are very promising, and may pave the way for a novel and cost-effective strategy to counteract or (bio)control healthcare-associated pathogens.

30 November 2018 in The EMBO Journal
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Saverio MarchiSaverio Marchi
Saverio Marchi
MCMariangela Corricelli
Mariangela Corricelli
Alessio BranchiniAlessio Branchini
Alessio Branchini
VVVeronica Angela Maria Vitto
Veronica Angela Maria Vitto
SMSonia Missiroli
Sonia Missiroli
PPPaolo Pinton
Paolo Pinton

17 February 2016 in PLOS ONE
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Elisabetta CaselliElisabetta Caselli
Elisabetta Caselli
MDMaria D'Accolti
Maria D'Accolti
AVAlberta Vandini
Alberta Vandini
LLLuca Lanzoni
Luca Lanzoni
MCMaria Teresa Camerada
Maria Teresa Camerada
SMSante Mazzacane
Sante Mazzacane
Contamination of hospital surfaces by clinically-relevant pathogens represents a major concern in healthcare facilities, due to its impact on transmission of healthcare-associated infections (HAIs) and to the growing drug resistance of HAI-associated pathogens. Routinely used chemical disinfectants show limitations in controlling pathogen contamination, due to their inefficacy in preventing recontamination and selection of resistant strains. Recently we observed that an innovative approach, based on a cleanser added with spores of non-pathogenic probiotic Bacilli, was effective in stably counteracting the growth of several pathogens contaminating hospital surfaces. Here, we wanted to study the impact of the Bacillus-based cleanser on the drug-resistance features of the healthcare pathogens population. In parallel, the ability of cleanser-derived Bacilli to infect hospitalized patients was also investigated. Collected data showed that Bacilli spores can germinate on dry inanimate surfaces, generating the bacterial vegetative forms which counteract the growth of pathogens and effectively substitute for them on treated surfaces. Strikingly, this procedure did not select resistant species, but conversely induced an evident decrease of antibiotic resistance genes in the contaminating microbial population. Also importantly, all the six HAI-positive patients hosted in the treated areas resulted negative for probiotic Bacilli, thus adding evidences to their safety-to-use. These results indicate that this probiotic-based procedure is active not only in controlling surface microbial contamination but also in lowering drug-resistant species, suggesting that it may have relevant clinical and therapeutical implications for the management of HAIs.

14 October 2020 in Science Translational Medicine
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MBMalin Bern
Malin Bern
JNJeannette Nilsen
Jeannette Nilsen
MFMattia Ferrarese
Mattia Ferrarese
KSKine M. K. Sand
Kine M. K. Sand
TGTorleif T. Gjølberg
Torleif T. Gjølberg
JAJan Terje Andersen
Jan Terje Andersen
The human albumin variant E505Q/T527M/K573P improves pharmacokinetics of protein-based drugs and facilitates transport across mucosal epithelia.

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SLSilvia Lombardi
Silvia Lombardi
MTMaria Francesca Testa
Maria Francesca Testa
MPMirko Pinotti
Mirko Pinotti
Alessio BranchiniAlessio Branchini
Alessio Branchini
The fidelity of protein synthesis, a process shaped by several mechanisms involving specialized ribosome regions and external factors, ensures the precise reading of sense and stop codons. However, premature termination codons (PTCs) arising from mutations may, at low frequency, be misrecognized and result in PTC suppression, named ribosome readthrough, with production of full-length proteins through the insertion of a subset of amino acids. Since some drugs have been identified as readthrough inducers, this fidelity drawback has been explored as a therapeutic approach in several models of human diseases caused by nonsense mutations. Here, we focus on the mechanisms driving translation in normal and aberrant conditions, the potential fates of mRNA in the presence of a PTC, as well as on the results obtained in the research of efficient readthrough-inducing compounds. In particular, we describe the molecular determinants shaping the outcome of readthrough, namely the nucleotide and protein context, with the latter being pivotal to produce functional full-length proteins. Through the interpretation of experimental and mechanistic findings, mainly obtained in lysosomal and coagulation disorders, we also propose a scenario of potential readthrough-favorable features to achieve relevant rescue profiles, representing the main issue for the potential translatability of readthrough as a therapeutic strategy.

23 November 2017 in Haematologica
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IDIrving Donadon
Irving Donadon
JMJohn H. McVey
John H. McVey
IGIsabella Garagiola
Isabella Garagiola
Alessio BranchiniAlessio Branchini
Alessio Branchini
MMMimosa Mortarino
Mimosa Mortarino
MPMirko Pinotti
Mirko Pinotti
Dissection of pleiotropic effects of missense mutations, scarcely investigated in inherited diseases, is fundamental to understanding genotype-phenotype relationships. Missense mutations might impair mRNA processing in addition to protein properties. As a model for haemophilia A (HA) we investigated the highly prevalent F8 p.R2016W/c.6046c>t (exon 19) mutation. In expression studies exploiting lentiviral vectors, we demonstrated that the aminoacid change impairs both secretion (FVIII:Ag 11.0+/-0.4% of wild-type) and activity (FVIII:C 6.0+/-2.9%). Investigations in patients’ ectopic F8 mRNA and with minigenes showed that the corresponding nucleotide change also decreases correct splicing to 70+/-5%, which is predicted to lower further FVIII:C (4.2+/-2%), consistently with FVIII:C levels observed in patients (1-5%). Masking the mutated exon 19 region by antisense U7snRNA supported the presence of a splicing regulatory element, potentially affected by several HA-causing missense mutations. Among these, the c.6037g>a (p.G2013R) reduced exon inclusion to 41±3% and the c.6053a>g (p.E2018G) to 28+/-2%, similarly to a variant affecting the 5’ splice site (c.6113a>g, p.N2038S, 26+/-2%), which displayed normal protein features upon recombinant expression. The p.G2013R remarkably reduced both FVIII:Ag (7.0+/-0.9%) and FVIII:C (8.4+/-0.8%), while the p.E2018G produced a dysfunctional molecule (FVIII:Ag, 69.0+/-18.1%; FVIII:C, 19.4+/-2.3%). In conclusion, differentially altered mRNA and protein patterns produce a gradient of residual FVIII:C, and clarify genotype-phenotype relationships. The integrated approach details pathogenic mechanisms that, only in combination, account for symptomatic HA and thus determine the HA mutation profile. Overall data provide a clear example of interplay between mRNA and protein mechanisms of disease that certainly operate in shaping many other inherited disorders.