Md Khadem Ali

Dr. Md Khadem Ali

Stanford University School of Medicine
orcid

Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 August 2017 in American Journal of Respiratory and Critical Care Medicine
Verified
Journal Article
Closed access
RKRichard Y. Kim
Richard Y. Kim
JPJames W. Pinkerton
James W. Pinkerton
Ama-Tawiah EssilfieAma-Tawiah Essilfie
Ama-Tawiah Essilfie
ARAvril Robertson
Avril Robertson
KBKatherine Baines
Katherine Baines
PHPhilip M. Hansbro
Philip M. Hansbro
Rationale: Severe, steroid-resistant asthma is the major unmet need in asthma therapy. Disease heterogeneity and poor understanding of pathogenic mechanisms hampers the identification of therapeutic targets. Excessive nucleotide-binding oligomerization domain–like receptor family, pyrin domain–containing 3 (NLRP3) inflammasome and concomitant IL-1β responses occur in chronic obstructive pulmonary disease, respiratory infections, and neutrophilic asthma. However, the direct contributions to pathogenesis, mechanisms involved, and potential for therapeutic targeting remain poorly understood, and are unknown in severe, steroid-resistant asthma. Objectives: To investigate the roles and therapeutic targeting of the NLRP3 inflammasome and IL-1β in severe, steroid-resistant asthma. Methods: We developed mouse models of Chlamydia and Haemophilus respiratory infection–mediated, ovalbumin-induced severe, steroid-resistant allergic airway disease. These models share the hallmark features of human disease, including elevated airway neutrophils, and NLRP3 inflammasome and IL-1β responses. The roles and potential for targeting of NLRP3 inflammasome, caspase-1, and IL-1β responses in experimental severe, steroid-resistant asthma were examined using a highly selective NLRP3 inhibitor, MCC950; the specific caspase-1 inhibitor Ac-YVAD-cho; and neutralizing anti–IL-1β antibody. Roles for IL-1β–induced neutrophilic inflammation were examined using IL-1β and anti-Ly6G. Measurements and Main Results: Chlamydia and Haemophilus infections increase NLRP3, caspase-1, IL-1β responses that drive steroid-resistant neutrophilic inflammation and airway hyperresponsiveness. Neutrophilic airway inflammation, disease severity, and steroid resistance in human asthma correlate with NLRP3 and IL-1β expression. Treatment with anti–IL-1β, Ac-YVAD-cho, and MCC950 suppressed IL-1β responses and the important steroid-resistant features of disease in mice, whereas IL-1β administration recapitulated these features. Neutrophil depletion suppressed IL-1β–induced steroid-resistant airway hyperresponsiveness. Conclusions: NLRP3 inflammasome responses drive experimental severe, steroid-resistant asthma and are potential therapeutic targets in this disease.

21 February 2020 in The Journal of Pathology
Verified
Journal Article
Closed access
PDF file
Md Khadem AliMd Khadem Ali
Md Khadem Ali
RKRichard Y. Kim
Richard Y. Kim
ABAlexandra C. Brown
Alexandra C. Brown
CDChantal Donovan
Chantal Donovan
KVKanth S. Vanka
Kanth S. Vanka
JHJay Horvat
Jay Horvat

1 July 2017 in The International Journal of Biochemistry & Cell Biology
Verified
Journal Article
Closed access
Md Khadem AliMd Khadem Ali
Md Khadem Ali
RKRichard Y. Kim
Richard Y. Kim
RKRafia Karim
Rafia Karim
JMJemma R. Mayall
Jemma R. Mayall
KMKristy L. Martin
Kristy L. Martin
JHJay Horvat
Jay Horvat

Verified
Journal Article
Open access
PDF file
KSKatharina Schimmel
Katharina Schimmel
Md Khadem AliMd Khadem Ali
Md Khadem Ali
STSerena Y. Tan
Serena Y. Tan
JTJoyce Teng
Joyce Teng
HDHuy M. Do
Huy M. Do
ESEdda Spiekerkoetter
Edda Spiekerkoetter
Arteriovenous malformations are a vascular anomaly typically present at birth, characterized by an abnormal connection between an artery and a vein (bypassing the capillaries). These high flow lesions can vary in size and location. Therapeutic approaches are limited, and AVMs can cause significant morbidity and mortality. Here, we describe our current understanding of the pathogenesis of arteriovenous malformations based on preclinical and clinical findings. We discuss past and present accomplishments and challenges in the field and identify research gaps that need to be filled for the successful development of therapeutic strategies in the future.

1 March 2023 in American Journal of Respiratory Cell and Molecular Biology
Verified
Journal Article
Open access
Lan ZhaoLan Zhao
Lan Zhao
JLJun-Li Luo
Jun-Li Luo
Md Khadem AliMd Khadem Ali
Md Khadem Ali
ESEdda Spiekerkoetter
Edda Spiekerkoetter
MNMark R Nicolls
Mark R Nicolls
Microorganisms colonize the human body. The lungs and respiratory tract, previously believed to be sterile, harbor diverse microbial communities and the genomes of bacteria (bacteriome), viruses (virome), and fungi (mycobiome). Recent advances in amplicon and shotgun metagenomic sequencing technologies and data-analyzing methods have greatly aided the identification and characterization of microbial populations from airways. The respiratory microbiome has been shown to play roles in human health and disease and is an area of rapidly emerging interest in pulmonary medicine. In this review, we provide updated information in the field by focusing on four lung conditions, including asthma, chronic obstructive pulmonary disease, cystic fibrosis, and idiopathic pulmonary fibrosis. We evaluate gut, oral, and upper airway microbiomes and how they contribute to lower airway flora. The discussion is followed by a systematic review of the lower airway microbiome in health and disease. We conclude with promising research avenues and implications for evolving therapeutics.

17 March 2020 in European Respiratory Journal
Verified
Journal Article
Closed access
PDF file
Md Khadem AliMd Khadem Ali
Md Khadem Ali
RKRichard Y. Kim
Richard Y. Kim
ABAlexandra C. Brown
Alexandra C. Brown
JMJemma R. Mayall
Jemma R. Mayall
RKRafia Karim
Rafia Karim
JHJay Horvat
Jay Horvat
Accumulating evidence highlights links between iron regulation and respiratory disease. Here, we assessed the relationship between iron levels and regulatory responses in clinical and experimental asthma.We show that cell-free iron levels are reduced in the bronchoalveolar lavage (BAL) supernatant of severe or mild–moderate asthma patients and correlate with lower forced expiratory volume in 1 s (FEV1). Conversely, iron-loaded cell numbers were increased in BAL in these patients and with lower FEV1/forced vital capacity (FVC) ratio. The airway tissue expression of the iron sequestration molecules divalent metal transporter 1 (DMT1) and transferrin receptor 1 (TFR1) are increased in asthma, withTFR1expression correlating with reduced lung function and increased Type-2 (T2) inflammatory responses in the airways. Furthermore, pulmonary iron levels are increased in a house dust mite (HDM)-induced model of experimental asthma in association with augmentedTfr1expression in airway tissue, similar to human disease. We show that macrophages are the predominant source of increased Tfr1 and Tfr1+macrophages have increasedIl13expression. We also show that increased iron levels induce increased pro-inflammatory cytokine and/or extracellular matrix (ECM) responses in human airway smooth muscle (ASM) cells and fibroblastsex vivoand induce key features of asthmain vivo, including airway hyper-responsiveness (AHR) and fibrosis, and T2 inflammatory responses.Together these complementary clinical and experimental data highlight the importance of altered pulmonary iron levels and regulation in asthma, and the need for a greater focus on the role and potential therapeutic targeting of iron in the pathogenesis and severity of disease.