Parikshit Bagchi

Dr. Parikshit Bagchi

Cell and Developemental Biology, University of Michigan, Ann Arbor, MI 48109, USA.
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Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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30 September 2021 in Viruses
Verified
Journal Article
Open access
PDF file
NNNikita Nanaware
Nikita Nanaware
ABAnwesha Banerjee
Anwesha Banerjee
SBSatarupa Mullick Bagchi
Satarupa Mullick Bagchi
PBParikshit Bagchi
Parikshit Bagchi
AMAnupam Mukherjee
Anupam Mukherjee
Dengue is a mosquito-borne viral disease (arboviral) caused by the Dengue virus. It is one of the prominent public health problems in tropical and subtropical regions with no effective vaccines. Every year around 400 million people get infected by the Dengue virus, with a mortality rate of about 20% among the patients with severe dengue. The Dengue virus belongs to the Flaviviridae family, and it is an enveloped virus with positive-sense single-stranded RNA as the genetic material. Studies of the infection cycle of this virus revealed potential host targets important for the virus replication cycle. Here in this review article, we will be discussing different stages of the Dengue virus infection cycle inside mammalian host cells and how host proteins are exploited by the virus in the course of infection as well as how the host counteracts the virus by eliciting different antiviral responses.

3 February 2023 in Viruses
Verified
Journal Article
Open access
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DDDebashree Dass
Debashree Dass
KDKishore Dhotre
Kishore Dhotre
MCMuskan Chakraborty
Muskan Chakraborty
ANAnushka Nath
Anushka Nath
ABAnwesha Banerjee
Anwesha Banerjee
AMAnupam Mukherjee
Anupam Mukherjee
MicroRNAs are a class of small, single-stranded, noncoding RNAs that regulate gene expression. They can be significantly dysregulated upon exposure to any infection, serving as important biomarkers and therapeutic targets. Numerous human DNA viruses, along with several herpesviruses, have been found to encode and express functional viral microRNAs known as vmiRNAs, which can play a vital role in host–pathogen interactions by controlling the viral life cycle and altering host biological pathways. Viruses have also adopted a variety of strategies to prevent being targeted by cellular miRNAs. Cellular miRNAs can act as anti- or proviral components, and their dysregulation occurs during a wide range of infections, including herpesvirus infection. This demonstrates the significance of miRNAs in host herpesvirus infection. The current state of knowledge regarding microRNAs and their role in the different stages of herpes virus infection are discussed in this review. It also delineates the therapeutic and biomarker potential of these microRNAs in future research directions.

28 February 2020 in Nature Communications
Verified
Journal Article
Open access
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PBParikshit Bagchi
Parikshit Bagchi
MTMauricio Torres
Mauricio Torres
LQLing Qi
Ling Qi
BTBilly Tsai
Billy Tsai
Although viruses must navigate the complex host endomembrane system to infect cells, the strategies used to achieve this is unclear. During entry, polyomavirus SV40 is sorted from the late endosome (LE) to the endoplasmic reticulum (ER) to cause infection, yet how this is accomplished remains enigmatic. Here we find that EMC4 and EMC7, two ER membrane protein complex (EMC) subunits, support SV40 infection by promoting LE-to-ER targeting of the virus. They do this by engaging LE-associated Rab7, presumably to stabilize contact between the LE and ER. These EMC subunits also bind to the ER-resident fusion machinery component syntaxin18, which is required for SV40-arrival to the ER. Our data suggest that EMC4 and EMC7 act as molecular tethers, inter-connecting two intracellular compartments to enable efficient transport of a virus between these compartments. As LE-to-ER transport of cellular cargos is unclear, our results have broad implications for illuminating inter-organelle cargo transport.

1 January 2020
Verified
Book Chapter
Closed access
PBParikshit Bagchi
Parikshit Bagchi

17 December 2024 in Viruses
Verified
Journal Article
Open access
PDF file
ABAnwesha Banerjee
Anwesha Banerjee
DDDebashree Dass
Debashree Dass
SMSoumik Mukherjee
Soumik Mukherjee
MKMollina Kaul
Mollina Kaul
R HARSHITHKUMARR HARSHITHKUMAR
R HARSHITHKUMAR
AMAnupam Mukherjee
Anupam Mukherjee
Epstein–Barr virus (EBV) and Kaposi’s sarcoma-associated herpesvirus (KSHV), which are the only members of the gamma(γ) herpesviruses, are oncogenic viruses that significantly contribute to the development of various human cancers, such as Burkitt’s lymphoma, nasopharyngeal carcinoma, Hodgkin’s lymphoma, Kaposi’s sarcoma, and primary effusion lymphoma. Oncogenesis triggered by γ-herpesviruses involves complex interactions between viral genetics, host cellular mechanisms, and immune evasion strategies. At the genetic level, crucial viral oncogenes participate in the disruption of cell signaling, leading to uncontrolled proliferation and inhibition of apoptosis. These viral proteins can modulate several cellular pathways, including the NF-κB and JAK/STAT pathways, which play essential roles in cell survival and inflammation. Epigenetic modifications further contribute to EBV- and KSHV-mediated cancerogenesis. Both EBV and KSHV manipulate host cell DNA methylation, histone modification, and chromatin remodeling, the interplay of which contribute to the elevation of oncogene expression and the silencing of the tumor suppressor genes. Immune factors also play a pivotal role in the development of cancer. The γ-herpesviruses have evolved intricate immune evasion strategies, including the manipulation of the major histocompatibility complex (MHC) and the release of cytokines, allowing infected cells to evade immune detection and destruction. In addition, a compromised immune system, such as in HIV/AIDS patients, significantly increases the risk of cancers associated with EBV and KSHV. This review aims to provide a comprehensive overview of the genetic, epigenetic, and immune mechanisms by which γ-herpesviruses drive cancerogenesis, highlighting key molecular pathways and potential therapeutic targets.

23 April 2021 in Frontiers in Microbiology
Verified
Journal Article
Open access
PDF file
PBParikshit Bagchi
Parikshit Bagchi
IBIndranil Banerjee
Indranil Banerjee
Miguel Martin-AcebesMiguel Martin-Acebes
Miguel Martin-Acebes
Editorial: Cell Organelle Exploitation by Viruses During Infection