Vaibhav Srivastava

Dr. Vaibhav Srivastava

Division of Glycoscience, Department of Chemistry, KTH Royal Institute of Technology, AlbaNova University Centre, Stockholm-18378, Sweden
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Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 August 2012 in Journal of Biological Chemistry
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Journal Article
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JSJehad Shaikhali
Jehad Shaikhali
LNLouise Norén
Louise Norén
JBJuan de Dios Barajas-López
Juan de Dios Barajas-López
Vaibhav SrivastavaVaibhav Srivastava
Vaibhav Srivastava
JKJanine König
Janine König
ÅSÅsa Strand
Åsa Strand
Plant genes that contain the G-box in their promoters are responsive to a variety of environmental stimuli. Bioinformatics analysis of transcriptome data revealed that the G-box element is significantly enriched in promoters of high light-responsive genes. From nuclear extracts of high light-treated Arabidopsis plants, we identified the AtbZIP16 transcription factor as a component binding to the G-box-containing promoter fragment of light-harvesting chlorophyll a/b-binding protein2.4 (LHCB2.4). AtbZIP16 belongs to the G-group of Arabidopsis basic region leucine zipper (bZIP) type transcription factors. Although AtbZIP16 and its close homologues AtbZIP68 and AtGBF1 bind the G-box, they do not bind the mutated half-sites of the G-box palindrome. In addition, AtbZIP16 interacts with AtbZIP68 and AtGBF1 in the yeast two-hybrid system. A conserved Cys residue was shown to be necessary for redox regulation and enhancement of DNA binding activity in all three proteins. Furthermore, transgenic Arabidopsis lines overexpressing the wild type version of bZIP16 and T-DNA insertion mutants for bZIP68 and GBF1 demonstrated impaired regulation of LHCB2.4 expression. Finally, overexpression lines for the mutated Cys variant of bZIP16 provided support for the biological significance of Cys330 in redox regulation of gene expression. Thus, our results suggest that environmentally induced changes in the redox state regulate the activity of members of the G-group of bZIP transcription factors.

22 March 2021 in Biomacromolecules
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Journal Article
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MMMatthias Marczynski
Matthias Marczynski
KJKun Jiang
Kun Jiang
MBMatthew Blakeley
Matthew Blakeley
Vaibhav SrivastavaVaibhav Srivastava
Vaibhav Srivastava
Francisco VilaplanaFrancisco Vilaplana
Francisco Vilaplana
OLOliver Lieleg
Oliver Lieleg

15 May 2009 in PLOS ONE
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KYKiran Yanamandra
Kiran Yanamandra
OAOleg Alexeyev
Oleg Alexeyev
VZVladimir Zamotin
Vladimir Zamotin
Vaibhav SrivastavaVaibhav Srivastava
Vaibhav Srivastava
ASAndrei Shchukarev
Andrei Shchukarev
Ludmilla A. Morozova-RocheLudmilla A. Morozova-Roche
Ludmilla A. Morozova-Roche
The conversion of soluble peptides and proteins into polymeric amyloid structures is a hallmark of many age-related degenerative disorders, including Alzheimer's disease, type II diabetes and a variety of systemic amyloidoses. We report here that amyloid formation is linked to another major age-related phenomenon − prostate tissue remodelling in middle-aged and elderly men. By using multidisciplinary analysis of corpora amylacea inclusions in prostate glands of patients diagnosed with prostate cancer we have revealed that their major components are the amyloid forms of S100A8 and S100A9 proteins associated with numerous inflammatory conditions and types of cancer. In prostate protease rich environment the amyloids are stabilized by dystrophic calcification and lateral thickening. We have demonstrated that material closely resembling CA can be produced from S100A8/A9 in vitro under native and acidic conditions and shows the characters of amyloids. This process is facilitated by calcium or zinc, both of which are abundant in ex vivo inclusions. These observations were supported by computational analysis of the S100A8/A9 calcium-dependent aggregation propensity profiles. We found DNA and proteins from Escherichia coli in CA bodies, suggesting that their formation is likely to be associated with bacterial infection. CA inclusions were also accompanied by the activation of macrophages and by an increase in the concentration of S100A8/A9 in the surrounding tissues, indicating inflammatory reactions. These findings, taken together, suggest a link between bacterial infection, inflammation and amyloid deposition of pro-inflammatory proteins S100A8/A9 in the prostate gland, such that a self-perpetuating cycle can be triggered and may increase the risk of malignancy in the ageing prostate. The results provide strong support for the prediction that the generic ability of polypeptide chains to convert into amyloids could lead to their involvement in an increasing number of otherwise apparently unrelated diseases, particularly those associated with ageing.

3 July 2017 in Biomacromolecules
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BKBenjamin T. Käsdorf
Benjamin T. Käsdorf
FWFlorian Weber
Florian Weber
GPGeorgia Petrou
Georgia Petrou
Vaibhav SrivastavaVaibhav Srivastava
Vaibhav Srivastava
TCThomas Crouzier
Thomas Crouzier
OLOliver Lieleg
Oliver Lieleg

4 November 2023 in Microbial Cell Factories
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PKPoonam Kumari
Poonam Kumari
NDNikky Deepa
Nikky Deepa
PTPrabodh Kumar Trivedi
Prabodh Kumar Trivedi
BSBrajesh K. Singh
Brajesh K. Singh
Vaibhav SrivastavaVaibhav Srivastava
Vaibhav Srivastava
ASAkanksha Singh
Akanksha Singh
Many plants possess immense pharmacological properties because of the presence of various therapeutic bioactive secondary metabolites that are of great importance in many pharmaceutical industries. Therefore, to strike a balance between meeting industry demands and conserving natural habitats, medicinal plants are being cultivated on a large scale. However, to enhance the yield and simultaneously manage the various pest infestations, agrochemicals are being routinely used that have a detrimental impact on the whole ecosystem, ranging from biodiversity loss to water pollution, soil degradation, nutrient imbalance and enormous health hazards to both consumers and agricultural workers. To address the challenges, biological eco-friendly alternatives are being looked upon with high hopes where endophytes pitch in as key players due to their tight association with the host plants. The intricate interplay between plants and endophytic microorganisms has emerged as a captivating subject of scientific investigation, with profound implications for the sustainable biosynthesis of pharmaceutically important secondary metabolites. This review delves into the hidden world of the "secret wedlock" between plants and endophytes, elucidating their multifaceted interactions that underpin the synthesis of bioactive compounds with medicinal significance in their plant hosts. Here, we briefly review endophytic diversity association with medicinal plants and highlight the potential role of core endomicrobiome. We also propose that successful implementation of in situ microbiome manipulation through high-end techniques can pave the way towards a more sustainable and pharmaceutically enriched future.

10 July 2012 in The Plant Cell
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JSJehad Shaikhali
Jehad Shaikhali
JBJuan de Dios Barajas-Lopéz
Juan de Dios Barajas-Lopéz
KÖKrisztina Ötvös
Krisztina Ötvös
DKDmitry Kremnev
Dmitry Kremnev
AGAna Sánchez Garcia
Ana Sánchez Garcia
ÅSÅsa Strand
Åsa Strand
Exposure of plants to light intensities that exceed the electron utilization capacity of the chloroplast has a dramatic impact on nuclear gene expression. The photoreceptor Cryptochrome 1 (cry1) is essential to the induction of genes encoding photoprotective components in Arabidopsis thaliana. Bioinformatic analysis of the cry1 regulon revealed the putative cis-element CryR1 (GnTCKAG), and here we demonstrate an interaction between CryR1 and the zinc finger GATA-type transcription factors ZINC FINGER PROTEIN EXPRESSED IN INFLORESCENCE MERISTEM LIKE1 (ZML1) and ZML2. The ZML proteins specifically bind to the CryR1 cis-element as demonstrated in vitro and in vivo, and TCTAG was shown to constitute the core sequence required for ZML2 binding. In addition, ZML2 activated transcription of the yellow fluorescent protein reporter gene driven by the CryR1 cis-element in Arabidopsis leaf protoplasts. T-DNA insertion lines for ZML2 and its homolog ZML1 demonstrated misregulation of several cry1-dependent genes in response to excess light. Furthermore, the zml1 and zml2 T-DNA insertion lines displayed a high irradiance-sensitive phenotype with significant photoinactivation of photosystem II (PSII), indicated by reduced maximum quantum efficiency of PSII, and severe photobleaching. Thus, we identified the ZML2 and ZML1 GATA transcription factors as two essential components of the cry1-mediated photoprotective response.