Department of Life and Environmental Sciences (DiSVA), Polytechnic University of Marche, Laboratory of Evolutionary Genetics, Via Brecce Bianche, I-60131 Ancona, Italy
Dr. Federica Carducci
Department of Life and Environmental Sciences (DiSVA), Polytechnic University of Marche, Laboratory of Evolutionary Genetics, Via Brecce Bianche, I-60131 Ancona, Italy
Supramolecular hydrogels formed from the self-assembly of low molecular weight derivatives are very attractive systems, because of their potential applications in nano- and bio-technology.
The vitellogenin gene family is constituted of variable gene numbers encoding for polypeptides that are precursors of yolk proteins and derivatives in oviparous and ovoviviparous vertebrates. The comprehension of which mechanisms have shaped the evolution of vtg gene family represents an attractive field of research. The primary intent of this review is to summarize the evolutionary hypotheses that have been proposed over recent decades, highlighting the differences between the proposed models. Overall in vertebrates the evolutionary history of this gene family is the result of complex modifications deeply influenced by events such as Whole Genome Duplications (WGDs), lineage-specific gene losses and duplications. Interestingly the last hypothesis allowed to date the vitellogenin gene cluster origin in the common ancestor of gnathostomes. In addition, in the last decades, several works evidenced non-nutritional functions such as antibacterial, immunological and antioxidant activities overcoming its classical view as a simple source of nourishment for the developing embryos.
1 October 2017 in European Journal of Pharmaceutics and Biopharmaceutics
Ray-finned fishes (Actinopterygii) are a very diverse group of vertebrates, encompassing species adapted to live in freshwater and marine environments, from the deep sea to high mountain streams. Genome sequencing offers a genetic resource for investigating the molecular bases of this phenotypic diversity and these adaptations to various habitats. The wide range of genome sizes observed in fishes is due to the role of transposable elements (TEs), which are powerful drivers of species diversity. Analyses performed to date provide evidence that class II DNA transposons are the most abundant component in most fish genomes and that compared to other vertebrate genomes, many TE superfamilies are present in actinopterygians. Moreover, specific TEs have been reported in ray-finned fishes as a possible result of an intricate relationship between TE evolution and the environment. The data summarized here underline the biological interest in Actinopterygii as a model group to investigate the mechanisms responsible for the high biodiversity observed in this taxon.
Repetitive DNA is an intriguing portion of the genome still not completely discovered and shows a high variability in terms of sequence, genomic organization, and evolutionary mode. On the basis of the genomic organization, it includes satellite DNAs, which are organized as long arrays of head-to-tail linked repeats, and transposable elements, which are dispersed throughout the genome. These repeated elements represent a considerable fraction of vertebrate genomes contributing significantly in species evolution. In this review, we focus our attention on Rex1, Rex3 and Rex6, three elements specific of teleost genomes. We report an overview of data available on these retroelements highlighting their significative impact in chromatin and heterochromatin organization, in the differentiation of sex chromosomes, in the formation of supernumerary chromosomes, and in karyotype evolution in teleosts.