Serge Olivier Kotchi

Dr. Serge Olivier Kotchi

Public Health Agency of Canada – National Microbiology Laboratory, Saint-Hyacinthe QC, Canada
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Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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19 February 2019 in PLOS ONE
Verified
Journal Article
Open access
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SGSalima Gasmi
Salima Gasmi
NONicholas H. Ogden
Nicholas H. Ogden
MRMarion Ripoche
Marion Ripoche
PLPatrick A. Leighton
Patrick A. Leighton
RLRobbin L. Lindsay
Robbin L. Lindsay
JKJules K. Koffi
Jules K. Koffi
Lyme disease, the most commonly reported vector-borne disease in North America, is caused by the spirochete Borrelia burgdorferi sensu stricto, which is transmitted by Ixodes scapularis in eastern Canada and Ixodes pacificus in western Canada. Recently, the northward range expansion of I. scapularis ticks, in south-eastern Canada, has resulted in a dramatic increase in the incidence of human Lyme disease. Detecting emerging areas of Lyme disease risk allows public health to target disease prevention efforts. We analysed passive tick surveillance data from Ontario and Manitoba to i) assess the relationship between the total numbers of I. scapularis submissions in passive surveillance from humans, and the number of human Lyme disease cases, and ii) develop province-specific acarological indicators of risk that can be used to generate surveillance-based risk maps. We also assessed associations between numbers of nymphal I. scapularis tick submissions only and Lyme disease case incidence. Using General Estimating Equation regression, the relationship between I. scapularis submissions (total numbers and numbers of nymphs only) in each census sub-division (CSD) and the number of reported Lyme disease cases was positively correlated and highly significant in the two provinces (P ≤ 0.001). The numbers of I. scapularis submissions over five years discriminated CSDs with ≥ 3 Lyme disease cases from those with < 3 cases with high accuracy when using total numbers of tick submission (Receiver Operating Characteristics area under the curve [AUC] = 0.89) and moderate accuracy (AUC = 0.78) when using nymphal tick submissions only. In Ontario the optimal cut-off point was a total 12 tick submissions from a CSD over five years (Sensitivity = 0.82, Specificity = 0.84), while in Manitoba the cut-off point was five ticks (Sensitivity = 0.71, Specificity = 0.79) suggesting regional variability of the risk of acquiring Lyme disease from an I. scapularis bite. The performances of the acarological indicators developed in this study for Ontario and Manitoba support the ability of passive tick surveillance to provide an early signal of the existence Lyme disease risk areas in regions where ticks and the pathogens they transmit are expanding their range.

22 April 2021 in Remote Sensing
Verified
Journal Article
Open access
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YMYi Moua
Yi Moua
SKSerge Olivier Kotchi
Serge Olivier Kotchi
ALAntoinette Ludwig
Antoinette Ludwig
SBStéphanie Brazeau
Stéphanie Brazeau
Transmission of vector-borne diseases (VBDs) relies on the presence of their vectors. Good knowledge of their habitat distribution could inform of their presence and then the potential transmission risk. In Canada, West Nile virus (WNV), a VBD transmitted by mosquitoes of the Culex genus to birds, humans, and other mammals, was first reported in 2002. Since then, human cases have been reported every year. To reduce the health burden of the disease and to guide the vector control efforts, this work aims to provide a map of habitat suitability of the main vectors of WNV, Culex pipiens-restuans, in southern Quebec and eastern Ontario at 30 m spatial resolution. Landsat 8-OTI/TIRS images were combined with existing geographical data to characterize vegetated and paved areas in urban and peri-urban areas and to create a land use land cover map related to environmental determinants of Culex pipiens-restuans. Landscape metrics were calculated to characterize the neighborhood environment. They were used with 1008 presence sites of the vectors to build species distribution models with Maxent, a model based on the maximum entropy principle, and to predict habitat suitability for Culex pipiens-restuans in the study area. The performance of the models was very good, with a mean area under the curve of 0.92 and a continuous Boyce index of 0.97. A habitat suitability map of the whole study area was created for Culex pipiens-restuans. The resulting map and environment analysis highlight the importance of the edge of vegetation and mixed or paved areas for the bio-ecology of Culex pipiens-restuans.

2 May 2019 in Canada Communicable Disease Report
Verified
Journal Article
Closed access
SKSerge Olivier Kotchi
Serge Olivier Kotchi
CBC Bouchard
C Bouchard
ALA Ludwig
A Ludwig
EREe Rees
Ee Rees
SBS Brazeau
S Brazeau
The number of human cases of several climate-related infectious diseases, including tick- and mosquito-borne diseases, has increased in Canada and other parts of the world since the end of the last century. Predicting and mapping the risks associated with these diseases using environmental and climatic determinants derived from satellite images is an emerging method that can support research, surveillance, prevention and control activities and help to better assess the impacts of climate change in Canada. Earth observation images can be used to systematically monitor changes in the Earth's surface and atmosphere at different scales of time and space. These images can inform estimation and monitoring of environmental and climatic determinants, and thus disease prediction and risk mapping. The current array of Earth observation satellites provides access to a large quantity and variety of data. These data have different characteristics in terms of spatial, temporal and thematic precision and resolution. The objectives of this overview are to describe how Earth observation images may inform risk assessment and mapping of tick-borne and mosquito-borne diseases in Canada, their potential benefits and limitations, the implications and next steps.

2 February 2021 in Remote Sensing
Verified
Journal Article
Open access
PDF file
SKSerge Olivier Kotchi
Serge Olivier Kotchi
CBCatherine Bouchard
Catherine Bouchard
SBStéphanie Brazeau
Stéphanie Brazeau
NONicholas H. Ogden
Nicholas H. Ogden
Climate change is facilitating the geographic range expansion of populations of the tick vector of Lyme disease Ixodes scapularis in Canada. Here, we characterize and map the spatio-temporal variability of environments suitable for I. scapularis using Earth observation (EO) data. A simple algorithm for I. scapularis occurrence (cumulative degree-days and forest: CSDF) was developed by combining cumulative annual surface degree-days above 0 °C and forest cover. To map the environmental risk of I. scapularis (risk of I. scapularis: RIS) in central and eastern Canada from 2000 to 2015, CSDF was adjusted using data from an I. scapularis population model. CSDF was validated using cumulative annual degree days >0 °C (CADD) from meteorological stations, and CSDF was strongly associated with CADD (n = 52, R2 > 0.86, p < 0.001). Data on field surveillance for I. scapularis ticks (2008 to 2018) were used to validate the risk maps. The presence of I. scapularis ticks was significantly associated with CSDF, and at a limit of 2800, sensitivity approached 100%. RIS increased over the study period, with the highest values in 2012 and the lowest in 2000. The RIS was on average higher in Ontario and Quebec compared to other provinces, and it was higher in the southern parts of the provinces. The proportion of the populated areas with a positive RIS increased on average in central and eastern Canada from 2000 to 2015. Predicted I. scapularis occurrence identifies areas with a more probable risk of tick bites, Lyme disease, and other I. scapularis-borne diseases, which can help guide targeted surveillance, prevention, and control interventions.

1 September 2018 in Ticks and Tick-borne Diseases
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Journal Article
Open access
SMSamir Mechai
Samir Mechai
GMGabriele Margos
Gabriele Margos
EFEdward J. Feil
Edward J. Feil
LLL. Robbin Lindsay
L. Robbin Lindsay
PMPascal Michel
Pascal Michel
NONick H. Ogden
Nick H. Ogden
In North America, different strains of the Lyme disease-causing bacterium Borrelia burgdorferi sensu stricto cluster into phylogenetic groups that are associated with different levels of pathogenicity and, for some, specific rodent reservoir hosts. Here we explore whether landscape connectivity, by impacting host dispersal, influences B. burgdorferi s.s. spread patterns. This question is central to modelling spatial patterns of the spread of Lyme disease risk in the zone of northward range-expansion of B. burgdorferi s.s. in southeastern Canada where the study was conducted. We used multi-locus sequence typing (MLST) to characterise B. burgdorferi s.s. in positive ticks collected at 13 sites in southern Quebec, Canada during the early stages of B. burgdorferi s.s. invasion. We used mixed effects logistic regression to investigate whether landscape connectivity (probability of connectivity; PC) affected the probability that samples collected at different sites were of the same strain (MLST sequence type: ST). PC was calculated from a habitat map based on high spatial resolution (15 m) Landsat 8 imagery to identify woodland habitat that are preferred by rodent hosts of B. burgdorferi s.s. There was a significant positive association between the likelihood that two samples were of the same ST and PC, when PC values were grouped into three categories of low, medium and high. When analysing data for individual STs, samples at different sites were significantly more likely to be the same when PC was higher for the rodent-associated ST1. These findings support the hypothesis that dispersion trajectories of B. burgdorferi s.s. in general, and some rodent-associated strains in particular, are at least partly determined by landscape connectivity. This may suggest that dispersion of B. burgdorferi s.s. is more common by terrestrial mammal hosts (which would likely disperse according to landscape connectivity) than by birds, the dispersal of which is likely less constrained by landscape. This study suggests that accounting for landscape connectivity may improve model-based predictions of spatial spread patterns of B. burgdorferi s.s. The findings are consistent with possible past dispersal patterns of B. burgdorferi s.s. as determined by phylogeographic studies.

7 August 2021 in Pathogens
Verified
Journal Article
Open access
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ALAnne-Marie Lowe
Anne-Marie Lowe
KBKarl Forest Berard
Karl Forest Berard
RTRichard Trudel
Richard Trudel
ELErnest Lo
Ernest Lo
PGPhilippe Gamache
Philippe Gamache
ALAntoinette Ludwig
Antoinette Ludwig
Current climatic conditions limit the distribution of Aedes (Stegomyia) albopictus (Skuse, Diptera: Culicidae) in the north, but predictive climate models suggest this species could establish itself in southern Canada by 2040. A vector of chikungunya, dengue, yellow fever, Zika and West Nile viruses, the Ae. Albopictus has been detected in Windsor, Ontario since 2016. Given the potential public health implications, and knowing that Aedes spp. can easily be introduced by ground transportation, this study aimed to determine if specimens could be detected, using an adequate methodology, in southern Québec. Mosquitoes were sampled in 2016 and 2017 along the main roads connecting Canada and the U.S., using Biogent traps (Sentinel-2, Gravide Aedes traps) and ovitraps. Overall, 24 mosquito spp. were captured, excluding Ae. Albopictus, but detecting one Aedes (Stegomyia) aegypti (Skuse) specimen (laid eggs). The most frequent species among captured adults were Ochlerotatus triseriatus, Culex pipiens complex, and Ochlerotatus japonicus (31.0%, 26.0%, and 17.3%, respectively). The present study adds to the increasing number of studies reporting on the range expansions of these mosquito species, and suggests that ongoing monitoring, using multiple capture techniques targeting a wide range of species, may provide useful information to public health with respect to the growing risk of emerging mosquito-borne diseases in southern Canada.