Soumyava Basu

Soumyava Basu


Research Focus & Metrics

Academic Career Length

17Years (2010-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2014 in Journal of Ophthalmic Inflammation and Infection
Verified
Journal Article
Open access
PDF file
SBSoumyava Basu
Soumyava Basu
SMSirajum Monira
Sirajum Monira
RMRohit R Modi
Rohit R Modi
NCNuzhat Choudhury
Nuzhat Choudhury
NMNeha Mohan
Neha Mohan
SPSatya R Panigrahi
Satya R Panigrahi
Ocular tuberculosis (TB) can affect nearly every ocular tissue, leading to a variety of vision-threatening clinical manifestations. The goal of this study is to estimate the degree, duration, and causes of visual impairment in eyes affected by ocular TB.

1 March 2013 in Eye
Verified
Journal Article
Closed access
SBSoumyava Basu
Soumyava Basu
SNS Nayak
S Nayak
TPT R Padhi
T R Padhi
TDT Das
T Das

1 November 2017 in Investigative Ophthalmology & Visual Science
Verified
Journal Article
Open access
PDF file
RTRavichandra Tagirasa
Ravichandra Tagirasa
SPShaifaly Parmar
Shaifaly Parmar
MBManas R. Barik
Manas R. Barik
SDSatish Devadas
Satish Devadas
SBSoumyava Basu
Soumyava Basu
Purpose: Intraocular inflammation in tuberculosis-associated uveitis (TBU) is usually widespread, and responds unpredictably to treatment. Herein, we analyze the intraocular T-cell response in TBU for its surface phenotype, antigenic specificity, and functional characteristics to explain the above observations. Methods: We isolated T cells from vitreous humor samples of patients with TBU and non-TB uveitis (controls). These were directly stained for surface markers CD4, CD8, CD45RO, CD45RA, CCR7, as well as intracellular cytokines IFN-γ, TNF-α, and IL-17 and analyzed on flow cytometry. Antigenic specificity was determined by activating with Mycobacterium tuberculosis–specific antigen Early Secreted Antigenic Target-6 (ESAT-6) or retinal crude extract (RCE). Activation-induced cell death (AICD) characteristics of each T-cell population were analyzed by staining for PI-Annexin V, Fas-FasL, phospho-Akt, and phospho-Erk1/2. Results: Immunophenotyping of vitreous humor samples demonstrated polyfunctional effector and central memory CD4+ T helper cells coexpressing IFN-γ, TNF-α, and IL-17. Both ESAT-6 and RCE (autoreactive) specificity was found in T cells extracted from TBU samples; however, the mycobacterial and autoreactive T-cell populations differed in their sensitivity to AICD. Autoreactive T cells appeared to resist AICD through decreased expression of apoptotic markers, FasL and caspase-3, sustained phosphorylation of Akt, and lowered Erk1/2 activity. Conclusions: Autoreactive T cells are present in TBU eyes and are relatively resistant to AICD. An understanding of this epiphenomenon could be crucial in planning treatment of TBU patients, and interpreting response to anti-TB therapy.

25 March 2014 in Journal of Ophthalmic Inflammation and Infection
Verified
Journal Article
Open access
PDF file
PBPraveen Kumar Balne
Praveen Kumar Balne
RMRohit Ramesh Modi
Rohit Ramesh Modi
NCNuzhat Choudhury
Nuzhat Choudhury
NMNeha Mohan
Neha Mohan
MBManas Ranjan Barik
Manas Ranjan Barik
SBSoumyava Basu
Soumyava Basu
Background: Polymerase chain reaction (PCR) assay can be a useful method for definitive diagnosis in paucibacillary infections such as ocular tuberculosis (TB). In this study, we have evaluated factors affecting PCR outcomes in patients with clinically suspected ocular TB. Patients with clinically suspected ocular TB were investigated by PCR of aqueous or vitreous samples. Three control groups were also tested: group 1 included culture-proven non-tuberculous endophthalmitis, group 2 culture-negative non-tuberculous endophthalmitis, and group 3 patients undergoing surgery for uncomplicated cataract. PCR targeted one or more of following targets: IS6110, MPB64, and protein b genes of Mycobacterium tuberculosis complex. Multiple regression analysis (5% level of significance) was done to evaluate the associations between positive PCR outcome and laterality of disease, tuberculin skin test (TST)/interferon-gamma release assay (IGRA), chest radiography, and type of sample (aqueous or vitreous). The main outcome measures were positive PCR by one or more gene targets, and factors influencing positive PCR outcomes. Results: All 114 samples were tested for MPB64, 110 for protein b, and 88 for IS6110. MPB64 was positive in 70.2% (n = 80) of tested samples, protein b in 40.0% (n = 44), and IS6110 in only 9.1% (n = 8). DNA sequencing of amplicons from four randomly chosen PCR reactions showed homology for M. tuberculosis complex. Of the 80 PCR-positive patients, 71 completed a full course of antitubercular therapy, of which 65 patients (91.5%) had complete resolution of inflammation at final follow-up. Among controls, 12.5% (3 out of 24) in group 1 and 18.7% (6 out of 32) in group 2 also tested positive by PCR. No PCR-positive outcome was observed in control group 3 (n = 25). Multiple regression analysis revealed significant association of positive PCR outcome with bilateral presentation, but not with a positive TST/IGRA, chest radiography, or type of sample (aqueous/vitreous) used. Conclusions: Careful selection of gene targets can yield high PCR positivity in clinically suspected ocular TB. Bilateral disease presentation but not any evidence of latent systemic TB influences PCR outcomes. False-positive results may be seen in ocular inflammation unrelated to ocular TB.

1 September 2020 in Tuberculosis
Verified
Journal Article
Closed access
SBSoumyava Basu
Soumyava Basu
PEPaul Elkington
Paul Elkington
NRNarsing A. Rao
Narsing A. Rao

1 November 2013 in Journal of Clinical Microbiology
Verified
Journal Article
Closed access
PDF file
PBPraveen Kumar Balne
Praveen Kumar Balne
MBManas Ranjan Barik
Manas Ranjan Barik
SSSavitri Sharma
Savitri Sharma
SBSoumyava Basu
Soumyava Basu
A loop-mediated isothermal amplification (LAMP) assay targeting the mpb64 gene for the diagnosis of intraocular tuberculosis was highly specific (100%), sensitive (85.7%), rapid, and easy to perform. The LAMP assay can be an alternative to conventional PCR for the diagnosis of ocular tuberculosis in resource-limited settings.