Andrey Manakhov

Mr. Andrey Manakhov

Vavilov Institute of General Genetics Russian Academy of Sciences
orcid

Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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31 December 2023 in Plants
Verified
Journal Article
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ESEkaterina Sokolova
Ekaterina Sokolova
OMOlga Viktorovna Mishukova
Olga Viktorovna Mishukova
IHInna Viktorovna Hlistun
Inna Viktorovna Hlistun
ITIrina Nikolaevna Tromenschleger
Irina Nikolaevna Tromenschleger
ATArtem Y. Tikunov
Artem Y. Tikunov
EVElena Nikolaevna Voronina
Elena Nikolaevna Voronina
The amalgamation of mineral and targeted bacterial preparations represents a new generation of agricultural technology. Inoculation with combined preparations of microorganisms is more effective than inoculation with a single microorganism in stimulating plant growth by providing a more balanced diet for various crops. In this work, the effect of inoculation of 20 consortium variants on the yield indicators of three crops (wheat, buckwheat, corn) and the soil microbiome in the open field was investigated. The soil microbiome was defined by 16S rRNA sequences through NGS. The species richness of the soil microbial community (alpha diversity) was similar for all studied samples. A beta-diversity analysis revealed that the microbial diversity of three soil samples (C.bw, F.bw and Soil.bw) differed significantly from all others. At the phylum level, the number of Acidobacteriota and Firmicutes in these samples was increased. For the combination “Consortium C (Rothia endophytic GMG9 and Azotobacter chroococcum GMG39)—buckwheat”, a systemic positive improvement in all growth and yield indicators was observed. The soil of the site where buckwheat grew, inoculated by Consortium C, contained significantly more available phosphorus than all other soil samples. Such results can be explained both by the direct action of a consortium of phosphate-immobilizing and nitrogen-fixing bacteria and acidification of the medium due to an increase in phylum Acidobacteriota bacteria in the soil.

1 June 2018 in Reproductive Toxicology
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Journal Article
Closed access
JPJ.Richard Pilsner
J.Richard Pilsner
ASAlex Shershebnev
Alex Shershebnev
YMYulia A. Medvedeva
Yulia A. Medvedeva
ASAlexander Suvorov
Alexander Suvorov
HWHaotian Wu
Haotian Wu
OSOleg Sergeyev
Oleg Sergeyev

14 March 2019 in Scientific Reports
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Andrey ManakhovAndrey Manakhov
Andrey Manakhov
TATatiana V. Andreeva
Tatiana V. Andreeva
OTOleg V. Trapezov
Oleg V. Trapezov
Nikolay KolchanovNikolay Kolchanov
Nikolay Kolchanov
EREvgeny I. Rogaev
Evgeny I. Rogaev
The fur colour of American mink (Neovison vison) involves over 35 traits, but only three of these have been linked to specific genes. Despite being the most popular, coat colours Silverblue and Hedlund white remain uncharacterized genetically. The former is the first genetic mutant of fur colour identified in minks, while the latter is a commercially valuable phenotype that can be dyed easily. Here, we performed the whole genome sequencing for two American mink breeds with Silverblue and Hedlund white coats. We identified mutations in splice donor sites of genes coding melanophilin (MLPH) and microphthalmia-associated transcription factor (MITF) that regulate melanosome transport and neural-crest-derived melanocyte development, respectively. Both mutations cause mRNA splicing impairments that lead to a shift in open reading frames of MLPH and MITF. We conclude that our data should be useful for tracking economically valuable fur traits in mink breeding programs to contribute to global fur production.

1 February 2017 in Molecular Phylogenetics and Evolution
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Journal Article
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ALAlexandra Andreevna Lisenkova
Alexandra Andreevna Lisenkova
AGA.P. Grigorenko
A.P. Grigorenko
TTT.V. Tyazhelova
T.V. Tyazhelova
TAT.V. Andreeva
T.V. Andreeva
FGFedor Gusev
Fedor Gusev
EREvgeny Rogaev
Evgeny Rogaev

18 January 2022 in Genes
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Journal Article
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IKIrina L Kuznetsova
Irina L Kuznetsova
NPNatalya V.asilievna Ponomareva
Natalya V.asilievna Ponomareva
EAEkaterina Alekseevna Alemastseva
Ekaterina Alekseevna Alemastseva
Andrey ManakhovAndrey Manakhov
Andrey Manakhov
TATatiana Andreeva
Tatiana Andreeva
EREvgeny I. Rogaev
Evgeny I. Rogaev
FKBP51 is a key stress-responsive regulator of the hypothalamic–pituitary–adrenal axis. To elucidate the contribution of rs1360780 FKBP5 C/T alleles to aging and longevity, we genotyped FKBP5 in a cohort of 800 non-demented and Alzheimer’s disease (AD) subjects of different age, taking into account the allele state of ApoE ε4, the major risk factor for AD. Furthermore, we searched for the association of FKBP5 with subcohorts of non-demented subjects evaluated for anxiety and resting-state quantitative EEG characteristics, associated with cognitive, emotional, and functional brain activities. We observed that increased state anxiety scores depend on the combination of the FKBP5 and ApoE genotypes and on the DNA methylation state of the FKBP5 promoter and ApoE genotype. We also found a significant gender-dependent correlation between FKBP5 promoter methylation and alpha-, delta-, and theta-rhythms. Analysis of the FKBP5 expression in an independent cohort revealed a significant upregulation of FKBP5 in females versus males. Our data suggest a synergistic effect of the stress-associated (FKBP5) and neurodegeneration-associated (ApoE) gene alleles on anxiety and the gender-dependent effect of FKBP5 on neurophysiological brain activity.

28 May 2020 in Animal Genetics
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Andrey ManakhovAndrey Manakhov
Andrey Manakhov
TAT. V. Andreeva
T. V. Andreeva
EREvgeny I. Rogaev
Evgeny I. Rogaev