Samuel Weinberg

Samuel Weinberg

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Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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4 August 2025 in Immunity
Verified
Journal Article
Open access
SWSamuel Weinberg
Samuel Weinberg
NCNavdeep S. Chandel
Navdeep S. Chandel
Mitochondria are key regulators of immune cell function, going beyond their traditional role in ATP and metabolite production to support anabolic processes and act as hubs for intracellular signaling. A key aspect of this signaling function is the production of mitochondrial reactive oxygen species (mtROS), which act as critical second messengers in both adaptive and innate immune regulation. Immune cells maintain an optimal concentration of mtROS to maintain physiological responses, and excessive or lack of mtROS production contributes to chronic inflammation, autoimmunity, and cancer. Here, we review the molecular mechanisms controlling mtROS production and detoxification, their role in shaping macrophage and T cell fate and function, and their implications for disease pathogenesis.

1 December 2020 in Journal of Clinical Investigation
Verified
Journal Article
Closed access
PDF file
KHKathryn A. Helmin
Kathryn A. Helmin
LMLuisa Morales-Nebreda
Luisa Morales-Nebreda
MAManuel A. Torres Acosta
Manuel A. Torres Acosta
KAKishore Anekalla
Kishore Anekalla
SCShang-Yang Chen
Shang-Yang Chen
BSBenjamin D. Singer
Benjamin D. Singer
Tregs require Foxp3 expression and induction of a specific DNA hypomethylation signature during development, after which Tregs persist as a self-renewing population that regulates immune system activation. Whether maintenance DNA methylation is required for Treg lineage development and stability and how methylation patterns are maintained during lineage self-renewal remain unclear. Here, we demonstrate that the epigenetic regulator ubiquitin-like with plant homeodomain and RING finger domains 1 (Uhrf1) is essential for maintenance of methyl-DNA marks that stabilize Treg cellular identity by repressing effector T cell transcriptional programs. Constitutive and induced deficiency of Uhrf1 within Foxp3+ cells resulted in global yet nonuniform loss of DNA methylation, derepression of inflammatory transcriptional programs, destabilization of the Treg lineage, and spontaneous inflammation. These findings support a paradigm in which maintenance DNA methylation is required in distinct regions of the Treg genome for both lineage establishment and stability of identity and suppressive function.

29 November 2021 in Molecular Cell
Verified
Journal Article
Closed access
JWJuncheng Wei
Juncheng Wei
BHBryan T. Harada
Bryan T. Harada
DLDan Lu
Dan Lu
RMRuihua Ma
Ruihua Ma
BGBeixue Gao
Beixue Gao
DFDeyu Fang
Deyu Fang

23 November 2022 in Science Advances
Verified
Journal Article
Open access
EMElena Montauti
Elena Montauti
SWSamuel Weinberg
Samuel Weinberg
PCPeng Chu
Peng Chu
SCShuvam Chaudhuri
Shuvam Chaudhuri
NMNikita L. Mani
Nikita L. Mani
DFDeyu Fang
Deyu Fang
The tumor microenvironment (TME) enhances regulatory T (T reg ) cell stability and immunosuppressive functions through up-regulation of lineage transcription factor Foxp3, a phenomenon known as T reg fitness or adaptation. Here, we characterize previously unknown TME-specific cellular and molecular mechanisms underlying T reg fitness. We demonstrate that TME-specific stressors including transforming growth factor–β (TGF-β), hypoxia, and nutrient deprivation selectively induce two Foxp3-specific deubiquitinases, ubiquitin-specific peptidase 22 ( Usp22 ) and Usp21 , by regulating TGF-β, HIF, and mTOR signaling, respectively, to maintain T reg fitness. Simultaneous deletion of both USPs in T reg cells largely diminishes TME-induced Foxp3 up-regulation, alters T reg metabolic signatures, impairs T reg -suppressive function, and alleviates T reg suppression on cytotoxic CD8 + T cells. Furthermore, we developed the first Usp22 -specific small-molecule inhibitor, which dramatically reduced intratumoral T reg Foxp3 expression and consequently enhanced antitumor immunity. Our findings unveil previously unappreciated mechanisms underlying T reg fitness and identify Usp22 as an antitumor therapeutic target that inhibits T reg adaptability in the TME.

16 July 2025 in Nature Immunology
Verified
Journal Article
Open access
PDF file
ESElizabeth M. Steinert
Elizabeth M. Steinert
BBBeatriz Furtado Bruza
Beatriz Furtado Bruza
VDVeronika D. Danchine
Veronika D. Danchine
RGRogan A. Grant
Rogan A. Grant
KVKarthik Vasan
Karthik Vasan
NCNavdeep S. Chandel
Navdeep S. Chandel
Mitochondrial electron transport chain (ETC) function is linked to the generation of ATP, signaling molecules including reactive oxygen species (ROS), pyrimidines and tricarboxylic acid cycle metabolites1. Mitochondrial electron transport is required for T cell proliferation2,3,4. However, which mitochondrial ETC functions are necessary for each dynamic state of CD8+ T cell responses is unknown. Here we report that impairing mitochondrial complex III function, which diminishes respiration, proton pumping linked to ATP production and superoxide production, decreases peripheral naive numbers, antigen-induced CD8+ T cell proliferation and memory formation. Acute stimulation of mitochondrial complex III-deficient CD8+ T cells induced an exhausted-like phenotype. Expression of Ciona intestinalis alternative oxidase (AOX) in mitochondrial complex III-deficient CD8+ T cells restores respiration without generating ROS or proton pumping, and rescues proliferation and the exhausted phenotype but not naive or memory formation. Thus, T cell development, proliferation and memory formation have distinct requirements for mitochondrial complex III ROS.

22 March 2021 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Open access
PDF file
XWXiufang Weng
Xiufang Weng
AKAmrendra Kumar
Amrendra Kumar
LCLiang Cao
Liang Cao
YHYing He
Ying He
EMEva Morgun
Eva Morgun
CWChyung-Ru Wang
Chyung-Ru Wang
Significance: We show CD1d-restricted natural killer (NK)T cells have distinct metabolic profiles compared with CD4 + conventional T cells. Mature NKT cells have poor fatty acid oxidation and exhibit reduced mitochondrial respiratory reserve in the steady state. In addition, NKT cell development is more sensitive to alterations in mitochondrial electron transport chain function than conventional T cells. Using T cell-specific mitochondrial complex III ablation in mice, we further demonstrate that mitochondrial metabolism plays a crucial role in NKT cell development and function by modulating T cell receptor/interleukin-15 signaling and NFAT activity. Collectively, our data provide evidence for a critical role of mitochondrial metabolism in NKT cell development and activation, opening a new avenue for NKT cell-based immunotherapy by manipulating NKT cell metabolism.