kokeb Dese

Mr. kokeb Dese

Jimma University, Jimma Institute of Technology, Ethiopia
orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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10 February 2021 in Cancers
Verified
Journal Article
Open access
PDF file
Gelan AyanaGelan Ayana
Gelan Ayana
kokeb Desekokeb Dese
kokeb Dese
Se-woon ChoeSe-woon Choe
Se-woon Choe
Transfer learning is a machine learning approach that reuses a learning method developed for a task as the starting point for a model on a target task. The goal of transfer learning is to improve performance of target learners by transferring the knowledge contained in other (but related) source domains. As a result, the need for large numbers of target-domain data is lowered for constructing target learners. Due to this immense property, transfer learning techniques are frequently used in ultrasound breast cancer image analyses. In this review, we focus on transfer learning methods applied on ultrasound breast image classification and detection from the perspective of transfer learning approaches, pre-processing, pre-training models, and convolutional neural network (CNN) models. Finally, comparison of different works is carried out, and challenges—as well as outlooks—are discussed.

4 January 2023 in Diagnostics
Verified
Journal Article
Open access
PDF file
Gelan AyanaGelan Ayana
Gelan Ayana
kokeb Desekokeb Dese
kokeb Dese
YAYisak Dereje Asefa
Yisak Dereje Asefa
YKYonas Kebede
Yonas Kebede
Hika BarkiHika Barki
Hika Barki
Se-woon ChoeSe-woon Choe
Se-woon Choe
Breast mass identification is a crucial procedure during mammogram-based early breast cancer diagnosis. However, it is difficult to determine whether a breast lump is benign or cancerous at early stages. Convolutional neural networks (CNNs) have been used to solve this problem and have provided useful advancements. However, CNNs focus only on a certain portion of the mammogram while ignoring the remaining and present computational complexity because of multiple convolutions. Recently, vision transformers have been developed as a technique to overcome such limitations of CNNs, ensuring better or comparable performance in natural image classification. However, the utility of this technique has not been thoroughly investigated in the medical image domain. In this study, we developed a transfer learning technique based on vision transformers to classify breast mass mammograms. The area under the receiver operating curve of the new model was estimated as 1 ± 0, thus outperforming the CNN-based transfer-learning models and vision transformer models trained from scratch. The technique can, hence, be applied in a clinical setting, to improve the early diagnosis of breast cancer.

1 November 2021 in Clinical Lymphoma Myeloma and Leukemia
Verified
Journal Article
Closed access
kokeb Desekokeb Dese
kokeb Dese
HRHakkins Raj
Hakkins Raj
GAGelan Ayana
Gelan Ayana
TYTilahun Yemane
Tilahun Yemane
WAWondimagegn Adissu
Wondimagegn Adissu
TKTimothy Kwa
Timothy Kwa

6 August 2024 in Artificial Intelligence Review
Verified
Journal Article
Open access
PDF file
Gelan AyanaGelan Ayana
Gelan Ayana
kokeb Desekokeb Dese
kokeb Dese
AAAhmed Mohammed Abagaro
Ahmed Mohammed Abagaro
KJKwangcheol Casey Jeong
Kwangcheol Casey Jeong
SYSoon-Do Yoon
Soon-Do Yoon
Se-woon ChoeSe-woon Choe
Se-woon Choe
Deep learning is revolutionizing various domains and significantly impacting medical image analysis. Despite notable progress, numerous challenges remain, necessitating the refinement of deep learning algorithms for optimal performance in medical image analysis. This paper explores the growing demand for precise and robust medical image analysis by focusing on an advanced deep learning technique, multistage transfer learning. Over the past decade, multistage transfer learning has emerged as a pivotal strategy, particularly in overcoming challenges associated with limited medical data and model generalization. However, the absence of well-compiled literature capturing this development remains a notable gap in the field. This exhaustive investigation endeavors to address this gap by providing a foundational understanding of how multistage transfer learning approaches confront the unique challenges posed by insufficient medical image datasets. The paper offers a detailed analysis of various multistage transfer learning types, architectures, methodologies, and strategies deployed in medical image analysis. Additionally, it delves into intrinsic challenges within this framework, providing a comprehensive overview of the current state while outlining potential directions for advancing methodologies in future research. This paper underscores the transformative potential of multistage transfer learning in medical image analysis, providing valuable guidance to researchers and healthcare professionals.

13 March 2023 in Scientific African
Verified
Journal Article
Open access
SASalih Aliyi
Salih Aliyi
kokeb Desekokeb Dese
kokeb Dese
HRHakkins Raj
Hakkins Raj

4 October 2022 in Cancer Control
Verified
Journal Article
Open access
BWBeshatu Debela Wako
Beshatu Debela Wako
kokeb Desekokeb Dese
kokeb Dese
RURoba Elala Ulfata
Roba Elala Ulfata
TNTilahun Alemayehu Nigatu
Tilahun Alemayehu Nigatu
STSolomon Kebede Turunbedu
Solomon Kebede Turunbedu
TKTimothy Kwa
Timothy Kwa
Objectives: Now a days, squamous cell carcinoma (SCC) margin assessment is done by examining histopathology images and inspection of whole slide images (WSI) using a conventional microscope. This is time-consuming, tedious, and depends on experts’ experience which may lead to misdiagnosis and mistreatment plans. This study aims to develop a system for the automatic diagnosis of skin cancer margin for squamous cell carcinoma from histopathology microscopic images by applying deep learning techniques. Methods: The system was trained, validated, and tested using histopathology images of SCC cancer locally acquired from Jimma Medical Center Pathology Department from seven different skin sites using an Olympus digital microscope. All images were preprocessed and trained with transfer learning pre-trained models by fine-tuning the hyper-parameter of the selected models. Results: The overall best training accuracy of the models become 95.3%, 97.1%, 89.8%, and 89.9% on EffecientNetB0, MobileNetv2, ResNet50, VGG16 respectively. In addition to this, the best validation accuracy of the models was 94.7%, 91.8%, 87.8%, and 86.7% respectively. The best testing accuracy of the models at the same epoch was 95.2%, 91.5%, 87%, and 85.5% respectively. From these models, EfficientNetB0 showed the best average training and testing accuracy than the other models. Conclusions: The system assists the pathologist during the margin assessment of SCC by decreasing the diagnosis time from an average of 25 minutes to less than a minute.