Mohammed almajidi

Mr. Mohammed almajidi

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Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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Journal Article
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Israa M ShamkhIsraa M Shamkh
Israa M Shamkh
MAMohammed almajidi
Mohammed almajidi
ASAhmed Hassen Shntaif
Ahmed Hassen Shntaif
PKPeter Tan Deng Kai
Peter Tan Deng Kai
Ngoc NH PhamNgoc NH Pham
Ngoc NH Pham
Tomasz M. KarpinskiTomasz M. Karpinski
Tomasz M. Karpinski
In recent years, novel strategies to control insects have been based on protease inhibitors (PIs). In this regard, molecular docking and molecular dynamics simulations have been extensively used to investigate insect gut proteases and the interactions of PIs for the development of resistance against insects. We, herein, report an in silico study of (disodium 5′-inosinate and petunidin 3-glucoside), (calcium 5′-guanylate and chlorogenic acid), chlorogenic acid alone, (kaempferol-3,7-di-O-glucoside with hyperoside and delphinidin 3-glucoside), and (myricetin 3′-glucoside and hyperoside) as potential inhibitors of acetylcholinesterase receptors, actin, α-tubulin, arginine kinase, and histone receptor III subtypes, respectively. The study demonstrated that the inhibitors are capable of forming stable complexes with the corresponding proteins while also showing great potential for inhibitory activity in the proposed protein-inhibitor combinations.

Verified
Journal Article
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ABAdina Borbely
Adina Borbely
LPLilla Pethő
Lilla Pethő
ISIldiko Szabo
Ildiko Szabo
MAMohammed almajidi
Mohammed almajidi
ASArnold Steckel
Arnold Steckel
GSGitta Schlosser
Gitta Schlosser
The use of peptide-drug conjugates has generated wide interest as targeted antitumor therapeutics. The anthracycline antibiotic, daunomycin, is a widely used anticancer agent and it is often conjugated to different tumor homing peptides. However, comprehensive analytical characterization of these conjugates via tandem mass spectrometry (MS/MS) is challenging due to the lability of the O-glycosidic bond and the appearance of MS/MS fragment ions with little structural information. Therefore, we aimed to investigate the optimal fragmentation conditions that suppress the prevalent dissociation of the anthracycline drug and provide good sequence coverage. In this study, we comprehensively compared the performance of common fragmentation techniques, such as higher energy collisional dissociation (HCD), electron transfer dissociation (ETD), electron-transfer higher energy collisional dissociation (EThcD) and matrix-assisted laser desorption/ionization–tandem time-of-flight (MALDI-TOF/TOF) activation methods for the structural identification of synthetic daunomycin-peptide conjugates by high-resolution tandem mass spectrometry. Our results showed that peptide backbone fragmentation was inhibited by applying electron-based dissociation methods to conjugates, most possibly due to the “electron predator” effect of the daunomycin. We found that efficient HCD fragmentation was largely influenced by several factors, such as amino acid sequences, charge states and HCD energy. High energy HCD and MALDI-TOF/TOF combined with collision induced dissociation (CID) mode are the methods of choice to unambiguously assign the sequence, localize different conjugation sites and differentiate conjugate isomers.

8 May 2019 in Egyptian Journal of Chemistry
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Journal Article
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MAMohammed almajidi
Mohammed almajidi
Organic sulfur compounds are natural components of crude oil. The presence of these compounds is undesirable, as they cause corrosion of equipment and contaminate the atmosphere during combustion. Sulfur compounds ruin expensive catalysts and release sulfur oxides into the atmosphere when burned, thereby creating environmental problems. Therefore, modern methods are needed to detect, identify and measure the concentrations of sulfur contents, water, and other elements in petroleum products. This work proposed a method for the quantitative analysis of petroleum and petroleum waste, including refinery sludges, based on the coulometry method The present article describes the methods to determine the total amount of sulfur in the waste oil and the number of hydrocarbons in the viscous oil wastes. Additionally, Karl- Fischer method was adapted to measure the content of water in crude oil. In our work reported here, a titration coulometric reagent administration and potentiometric detection using ion-selective electrodes has been worked out and applied for the determination of sulfur and water concentration in crude oil samples.