So Yeon Kim

Dr. So Yeon Kim

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Research Focus & Metrics

Academic Career Length

29Years (1998-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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18 July 2006 in Proceedings of the National Academy of Sciences
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Journal Article
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SKSo Yeon Kim
So Yeon Kim
ZGZemer Gitai
Zemer Gitai
AKAnika Kinkhabwala
Anika Kinkhabwala
LSLucy Shapiro
Lucy Shapiro
WMW. E. Moerner
W. E. Moerner
The actin cytoskeleton represents a key regulator of multiple essential cellular functions in both eukaryotes and prokaryotes. In eukaryotes, these functions depend on the orchestrated dynamics of actin filament assembly and disassembly. However, the dynamics of the bacterial actin homolog MreB have yet to be examined in vivo . In this study, we observed the motion of single fluorescent MreB–yellow fluorescent protein fusions in living Caulobacter cells in a background of unlabeled MreB. With time-lapse imaging, polymerized MreB [filamentous MreB (fMreB)] and unpolymerized MreB [globular MreB (gMreB)] monomers could be distinguished: gMreB showed fast motion that was characteristic of Brownian diffusion, whereas the labeled molecules in fMreB displayed slow, directed motion. This directional movement of labeled MreB in the growing polymer provides an indication that, like actin, MreB monomers treadmill through MreB filaments by preferential polymerization at one filament end and depolymerization at the other filament end. From these data, we extract several characteristics of single MreB filaments, including that they are, on average, much shorter than the cell length and that the direction of their polarized assembly seems to be independent of the overall cellular polarity. Thus, MreB, like actin, exhibits treadmilling behavior in vivo , and the long MreB structures that have been visualized in multiple bacterial species seem to represent bundles of short filaments that lack a uniform global polarity.

31 August 2017 in ACS Nano
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Journal Article
Closed access
SKSeong Ho Kim
Seong Ho Kim
KKKyoung-Ran Kim
Kyoung-Ran Kim
DADae-Ro Ahn
Dae-Ro Ahn
JLJi Eun Lee
Ji Eun Lee
EYEun Gyeong Yang
Eun Gyeong Yang
SKSo Yeon Kim
So Yeon Kim

1 March 2013 in Meat Science
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Journal Article
Closed access
SKSung-Jin Kim
Sung-Jin Kim
SMSea C. Min
Sea C. Min
HSHyo-Jin Shin
Hyo-Jin Shin
YLYun-Jeong Lee
Yun-Jeong Lee
ACAh Reum Cho
Ah Reum Cho
JHJaejoon Han
Jaejoon Han

31 August 2012 in Journal of Food Science
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Journal Article
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HPHye‐Yeon Park
Hye‐Yeon Park
SKSung‐Jin Kim
Sung‐Jin Kim
KKKi Myong Kim
Ki Myong Kim
YYYoung‐Sun You
Young‐Sun You
SKSo Yeon Kim
So Yeon Kim
JHJaejoon Han
Jaejoon Han

1 June 2021 in Food Chemistry
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Journal Article
Closed access
ICInyoung Choi
Inyoung Choi
DYDa Som Yoo
Da Som Yoo
YCYoonjee Chang
Yoonjee Chang
SKSo Yeon Kim
So Yeon Kim
JHJaejoon Han
Jaejoon Han

19 November 2015 in Molecules
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Journal Article
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SKSo Yeon Kim
So Yeon Kim
EYEun Gyeong Yang
Eun Gyeong Yang
Hypoxia-inducible factor (HIF) prolyl hydroxylases (PHDs) are members of the 2-oxoglutarate dependent non-heme iron dioxygenases. Due to their physiological roles in regulation of HIF-1α stability, many efforts have been focused on searching for selective PHD inhibitors to control HIF-1α levels for therapeutic applications. In this review, we first describe the structure of PHD2 as a molecular basis for structure-based drug design (SBDD) and various experimental methods developed for measuring PHD activity. We further discuss the current status of the development of PHD inhibitors enabled by combining SBDD approaches with high-throughput screening. Finally, we highlight the clinical implications of small molecule PHD inhibitors.