Alexey Nesterenko

Dr. Alexey Nesterenko

orcid

Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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30 September 2016 in Langmuir
Verified
Journal Article
Closed access
AKAndrei Yu. Kostritskii
Andrei Yu. Kostritskii
DKDiana A. Kondinskaia
Diana A. Kondinskaia
ANAlexey Nesterenko
Alexey Nesterenko
AGAndrey Gurtovenko
Andrey Gurtovenko

14 March 2016 in Scientific Reports
Verified
Journal Article
Open access
FEFedor M. Eroshkin
Fedor M. Eroshkin
ANAlexey Nesterenko
Alexey Nesterenko
ABAlexander V. Borodulin
Alexander V. Borodulin
NMNatalia Yu. Martynova
Natalia Yu. Martynova
GEGalina V. Ermakova
Galina V. Ermakova
AZAndrey G Zaraisky
Andrey G Zaraisky
Noggin4 is a Noggin family secreted protein whose molecular and physiological functions remain unknown. In this study, we demonstrate that in contrast to other Noggins, Xenopus laevis Noggin4 cannot antagonise BMP signalling; instead, it specifically binds to Wnt8 and inhibits the Wnt/β -catenin pathway. Live imaging demonstrated that Noggin4 diffusivity in embryonic tissues significantly exceeded that of other Noggins. Using the Fluorescence Recovery After Photobleaching (FRAP) assay and mathematical modelling, we directly estimated the affinity of Noggin4 for Wnt8 in living embryos and determined that Noggin4 fine-tune the Wnt8 posterior-to-anterior gradient. Our results suggest a role for Noggin4 as a unique, freely diffusing, long-range inhibitor of canonical Wnt signalling, thus explaining its ability to promote head development.

23 June 2016 in The Journal of Physical Chemistry B
Verified
Journal Article
Closed access
DKDiana A. Kondinskaia
Diana A. Kondinskaia
AKAndrei Yu. Kostritskii
Andrei Yu. Kostritskii
ANAlexey Nesterenko
Alexey Nesterenko
AAAlexandra Yu. Antipina
Alexandra Yu. Antipina
AGAndrey Gurtovenko
Andrey Gurtovenko

19 March 2018 in The Journal of Physical Chemistry B
Verified
Journal Article
Closed access
Philipp OrekhovPhilipp Orekhov
Philipp Orekhov
EKEkaterina Kholina
Ekaterina Kholina
MBMarine E. Bozdaganyan
Marine E. Bozdaganyan
ANAlexey Nesterenko
Alexey Nesterenko
IKIlya Kovalenko
Ilya Kovalenko
Marina StrakhovskayaMarina Strakhovskaya
Marina Strakhovskaya

13 November 2019 in Oxidative Medicine and Cellular Longevity
Verified
Journal Article
Open access
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Konstantin LyamzaevKonstantin Lyamzaev
Konstantin Lyamzaev
NSNatalia V. Sumbatyan
Natalia V. Sumbatyan
ANAlexey Nesterenko
Alexey Nesterenko
EKEkaterina Kholina
Ekaterina Kholina
NVNatalia Voskoboynikova
Natalia Voskoboynikova
Boris V. ChernyakBoris V. Chernyak
Boris V. Chernyak
Peroxidation of cardiolipin (CL) in the inner mitochondrial membrane plays a key role in the development of various pathologies and, probably, aging. The four fatty acid tails of CL are usually polyunsaturated, which makes CL particularly sensitive to peroxidation. Peroxidation of CL is involved in the initiation of apoptosis, as well as in some other important cellular signaling chains. However, the studies of CL peroxidation are strongly limited by the lack of methods for its tracing in living cells. We have synthesized a new mitochondria-targeted fluorescent probe sensitive to lipid peroxidation (dubbed MitoCLox), where the BODIPY fluorophore, carrying a diene-containing moiety (as in the C11-BODIPY (581/591) probe), is conjugated with a triphenylphosphonium cation (TPP+) via a long flexible linker that contains two amide bonds. The oxidation of MitoCLox could be measured either as a decrease of absorbance at 588 nm or as an increase of fluorescence in the ratiometric mode at 520/590 nm (emission). In CL-containing liposomes, MitoCLox oxidation was induced by cytochrome c and developed in parallel with cardiolipin oxidation. TPP+-based mitochondria-targeted antioxidant SkQ1, in its reduced form, inhibited oxidation of MitoCLox concurrently with the peroxidation of cardiolipin. Molecular dynamic simulations of MitoCLox in a cardiolipin-containing membrane showed affinity of positively charged MitoCLox to negatively charged CL molecules; the oxidizable diene moiety of MitoCLox resided on the same depth as the cardiolipin lipid peroxides. We suggest that MitoCLox could be used for monitoring CL oxidation in vivo and, owing to its flexible linker, also serve as a platform for producing peroxidation sensors with affinity to particular lipids.

1 October 2019 in Cell Reports
Verified
Journal Article
Open access
DKDaria D. Korotkova
Daria D. Korotkova
Vassily LyubetskyVassily Lyubetsky
Vassily Lyubetsky
AIAnastasia S. Ivanova
Anastasia S. Ivanova
LRLev I. Rubanov
Lev I. Rubanov
ASAlexandr Seliverstov
Alexandr Seliverstov
AZAndrey G Zaraisky
Andrey G Zaraisky
The molecular basis of higher regenerative capacity of cold-blooded animals comparing to warm-blooded ones is poorly understood. Although this difference in regenerative capacities is commonly thought to be a result of restructuring of the same regulatory gene network, we hypothesized that it may be due to loss of some genes essential for regeneration. We describe here a bioinformatic method that allowed us to identify such genes. For investigation in depth we selected one of them encoding transmembrane protein, named "c-Answer." Using the Xenopus laevis frog as a model cold-blooded animal, we established that c-Answer regulates regeneration of body appendages and telencephalic development through binding to fibroblast growth factor receptors (FGFRs) and P2ry1 receptors and promoting MAPK/ERK and purinergic signaling. This suggests that elimination of c-answer in warm-blooded animals could lead to decreased activity of at least two signaling pathways, which in turn might contribute to changes in mechanisms regulating regeneration and telencephalic development.