Tiit Lukk

Dr. Tiit Lukk

Department of Chemistry and Biotechnology, Tallinn University of Technology, Akadeemia tee 15, 12618 Tallinn, Estonia
orcid

Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
1 September 2021 in Renewable and Sustainable Energy Reviews
Verified
Journal Article
Closed access
ZUZeba Usmani
Zeba Usmani
Minaxi SharmaMinaxi Sharma
Minaxi Sharma
A K AwasthiA K Awasthi
A K Awasthi
Tiit LukkTiit Lukk
Tiit Lukk
MTMaria G Tuohy
Maria G Tuohy
VGVijai Kumar Gupta
Vijai Kumar Gupta

1 February 2021 in Bioresource Technology
Verified
Journal Article
Closed access
ZUZeba Usmani
Zeba Usmani
Minaxi SharmaMinaxi Sharma
Minaxi Sharma
A K AwasthiA K Awasthi
A K Awasthi
NSNallusamy Sivakumar
Nallusamy Sivakumar
Tiit LukkTiit Lukk
Tiit Lukk
VGVijai Kumar Gupta
Vijai Kumar Gupta

11 June 2014 in Biochemistry
Verified
Journal Article
Closed access
SMSudipta Majumdar
Sudipta Majumdar
Tiit LukkTiit Lukk
Tiit Lukk
JSJose O. Solbiati
Jose O. Solbiati
SBStefan Bauer
Stefan Bauer
SNSatish K. Nair
Satish K. Nair
JGJohn A. Gerlt
John A. Gerlt

2 April 2012 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Open access
PDF file
GGGiovanni Gonzalez-Gutierrez
Giovanni Gonzalez-Gutierrez
Tiit LukkTiit Lukk
Tiit Lukk
VAVinayak Agarwal
Vinayak Agarwal
DPDavid Papke
David Papke
SNSatish K. Nair
Satish K. Nair
CGClaudio Grosman
Claudio Grosman
The determination of structural models of the various stable states of an ion channel is a key step toward the characterization of its conformational dynamics. In the case of nicotinic-type receptors, different structures have been solved but, thus far, these different models have been obtained from different members of the superfamily. In the case of the bacterial member ELIC, a cysteamine-gated channel fromErwinia chrisanthemi, a structural model of the protein in the absence of activating ligand (and thus, conceivably corresponding to the closed state of this channel) has been previously generated. In this article, electrophysiological characterization of ELIC mutants allowed us to identify pore mutations that slow down the time course of desensitization to the extent that the channel seems not to desensitize at all for the duration of the agonist applications (>20 min). Thus, it seems reasonable to conclude that the probability of ELIC occupying the closed state is much lower for the ligand-bound mutants than for the unliganded wild-type channel. To gain insight into the conformation adopted by ELIC under these conditions, we solved the crystal structures of two of these mutants in the presence of a concentration of cysteamine that elicits an intracluster open probability of >0.9. Curiously, the obtained structural models turned out to be nearly indistinguishable from the model of the wild-type channel in the absence of bound agonist. Overall, our findings bring to light the limited power of functional studies in intact membranes when it comes to inferring the functional state of a channel in a crystal, at least in the case of the nicotinic-receptor superfamily.

1 February 2013 in The Journal of Immunology
Verified
Journal Article
Open access
PDF file
SKStacy L. Kelley
Stacy L. Kelley
Tiit LukkTiit Lukk
Tiit Lukk
SNSatish K. Nair
Satish K. Nair
RTRichard I Tapping
Richard I Tapping
Human monocyte differentiation Ag CD14 is a pattern recognition receptor that enhances innate immune responses to infection by sensitizing host cells to bacterial LPS (endotoxin), lipoproteins, lipoteichoic acid, and other acylated microbial products. CD14 physically delivers these lipidated microbial products to various TLR signaling complexes that subsequently induce intracellular proinflammatory signaling cascades upon ligand binding. The ensuing cellular responses are usually protective to the host but can also result in host fatality through sepsis. In this work, we have determined the x-ray crystal structure of human CD14. The structure reveals a bent solenoid typical of leucine-rich repeat proteins with an amino-terminal pocket that presumably binds acylated ligands including LPS. Comparison of human and mouse CD14 structures shows great similarity in overall protein fold. However, compared with mouse CD14, human CD14 contains an expanded pocket and alternative rim residues that are likely to be important for LPS binding and cell activation. The x-ray crystal structure of human CD14 presented in this article may foster additional ligand-bound structural studies, virtual docking studies, and drug design efforts to mitigate LPS-induced sepsis and other inflammatory diseases.

30 July 2015 in eLife
Verified
Journal Article
Open access
SDShihui Dong
Shihui Dong
WTWeixin Tang
Weixin Tang
Tiit LukkTiit Lukk
Tiit Lukk
YYYi Yu
Yi Yu
SNSatish Nair
Satish Nair
WDWilfred A van der Donk
Wilfred A van der Donk
The enterococcal cytolysin is a virulence factor consisting of two post-translationally modified peptides that synergistically kill human immune cells. Both peptides are made by CylM, a member of the LanM lanthipeptide synthetases. CylM catalyzes seven dehydrations of Ser and Thr residues and three cyclization reactions during the biosynthesis of the cytolysin large subunit. We present here the 2.2 Å resolution structure of CylM, the first structural information on a LanM. Unexpectedly, the structure reveals that the dehydratase domain of CylM resembles the catalytic core of eukaryotic lipid kinases, despite the absence of clear sequence homology. The kinase and phosphate elimination active sites that affect net dehydration are immediately adjacent to each other. Characterization of mutants provided insights into the mechanism of the dehydration process. The structure is also of interest because of the interactions of human homologs of lanthipeptide cyclases with kinases such as mammalian target of rapamycin.