Apparent net uptake of carbon dioxide (CO₂) during wintertime by an ∼ 90 year old Scots pine stand in northern Sweden led us to conduct canopy decoupling and subcanopy advection investigations over an entire year. Eddy covariance (EC) measurements ran simultaneously above and within the forest canopy for that purpose. We used the correlation of above‐ and below‐canopy standard deviation of vertical wind speed (σ_w) as decoupling indicator. We identified 0.33 m s⁻¹ and 0.06 m s⁻¹ as site‐specific σ_w thresholds for above‐ and below‐canopy coupling during nighttime (global radiation 20 W m⁻²) σ_w thresholds. Decoupling occurred in 53% of the annual nighttime and 14% of the annual daytime. The annual net ecosystem exchange (NEE), gross ecosystem exchange (GEE), and ecosystem respiration (R_eco) derived via two‐level filtered EC data were −357 g C m⁻², −1,138 g C m⁻², and 781 g C m⁻², respectively. In comparison, both single‐level friction velocity (u_*) and quality filtering resulted in ~ 22% higher NEE, mainly caused by ~ 16% lower R_eco. GEE remained similar among filtering regimes. Accounting for changes of CO₂ storage across the canopy in the single‐level filtered data could only marginally decrease these discrepancies. Consequently, advection appears to be responsible for the major part of this divergence. We conclude that the two‐level filter is necessary to adequately address decoupling and subcanopy advection at our site, and we recommend this filter for all forested EC sites.

We present data from two eddy covariance systems for determining the sensible and latent heat flux and the shear stress near the earth's surface. One measures continuously since September 2010 close to the village Ny-Ålesund, Svalbard, the other one was located on Kongsvegen glacier for a short period in April 2011. Two examples for small-scale variability are discussed: near surface external gravity waves associated with katabatic wind from the Broggerbreen glacier located a few kilometres southwestern of Ny-Ålesund, and an episode when the two eddy systems at the different measurement sites captured very different conditions at the same time. In case of gravity wave motion the eddy covariance method results in fictitious positive fluxes due to the strong correlation between temperature and vertical wind, which has to be considered carefully. The comparison between the two sites showed that generally the dynamical processes near the Earth’s surface for Ny-Ålesund and the Kongsvegen glacier are different and local. But there are also cases of synchronization due to synoptic influences, and then the same processes are visible at the two measurement sites. Both examples show that the boundary layer in Ny-Ålesund is not only affected by the main glaciers in the east of the village, but also by other orographical characteristics and synoptic issues. Therefore, the only meaningful way to deal with point measurements is to consider them in context with the surrounding orography and the general meteorological conditions.

Carbon dioxide sequestration from the atmosphere is commonly assessed using the eddy covariance method. Its net flux signal can be decomposed into gross primary production and ecosystem respiration components, but these have seldom been tested against independent methods. In addition, eddy covariance lacks the ability to partition carbon sequestration among individual trees or species within mixed forests. Therefore, we compared gross primary production from eddy covariance versus an independent method based on sap flow and water-use efficiency, as measured by the tissue heat balance method and δ¹³C of phloem contents, respectively. The latter measurements were conducted on individual trees throughout a growing season in a mixed broadleaf forest dominated by three tree species, namely English oak, narrow-leaved ash and common hornbeam (Quercus robur L., Fraxinus angustifolia Vahl, and Carpinus betulus L., respectively). In this context, we applied an alternative ecophysiological method aimed at verifying the accuracy of a state-of-the-art eddy covariance system while also offering a solution to the partitioning problem. We observed strong agreement in the ecosystem gross primary production estimates (R² = 0.56; P < 0.0001), with correlation being especially high and nearly on the 1:1 line in the period before the end of July (R² = 0.85; P < 0.0001). After this period, the estimates of gross primary production began to diverge. Possible reasons for the divergence are discussed, focusing especially on phenology and the limitation of the isotopic data. English oak showed the highest per-tree daily photosynthetic rates among tree species, but the smaller, more abundant common hornbeam contributed most to the stand-level summation, especially early in the spring. These findings provide a rigorous test of the methods and the species-level photosynthesis offers avenues for enhancing forest management aimed at carbon sequestration.

The occurrence of extreme drought poses a severe threat to forest ecosystems and reduces their capability to sequester carbon dioxide. This study analysed the impacts of a central European summer drought in 2015 on gross primary productivity (GPP) at two Norway spruce forest sites representing two contrasting climatic conditions—cold and humid climate at Bílý Kříž (CZ-BK1) vs. moderately warm and dry climate at Rájec (CZ-RAJ). The comparative analyses of GPP was based on a three-year eddy covariance dataset, where 2014 and 2016 represented years with normal conditions, while 2015 was characterized by dry conditions. A significant decline in the forest GPP was found during the dry year of 2015, reaching 14% and 6% at CZ-BK1 and CZ-RAJ, respectively. The reduction in GPP coincided with high ecosystem respiration (R_eco) during the dry year period, especially during July and August, when several heat waves hit the region. Additional analyses of GPP decline during the dry year period suggested that a vapour pressure deficit played a more important role than the soil volumetric water content at both investigated sites, highlighting the often neglected importance of considering the species hydraulic strategy (isohydric vs. anisohydric) in drought impact assessments. The study indicates the high vulnerability of the Norway spruce forest to drought stress, especially at sites with precipitation equal or smaller than the atmospheric evaporative demand. Since central Europe is currently experiencing large-scale dieback of Norway spruce forests in lowlands and uplands (such as for CZ-RAJ conditions), the findings of this study may help to quantitatively assess the fate of these widespread cultures under future climate projections, and may help to delimitate the areas of their sustainable production.

Partitioning of evapotranspiration (ET) into transpiration (T) and residual evaporation (E) is a challenging but important task in order to assess the dynamics of increasingly scarce water resources in forest ecosystems. The T/ET ratio has been linked to the ecosystem water use efficiency of temperate forests, and thus is an important index for understanding utilization of water resources under global climate change. We used concurrent sap flow and eddy-covariance measurements to quantify the ET partitioning in pure European beech forest during the 2019–2020 period. The sap flow data were upscaled to stand level T and combined with stand level ET to calculate the T/ET ratio. We analysed intra-annual dynamics, the effect of seasonality and the impact of meteorological conditions on T, ET and T/ET. Annual T/ET of a pure European beech ecosystem was 0.48, falling at the lower end of reported global T/ET values for forest ecosystems. T/ET showed significant seasonal differences throughout spring (T/ET = 0.28), summer (T/ET = 0.62) and autumn (T/ET = 0.35). Air temperature (R² = 0.45–0.63), VPD (R² = 0.47–0.6) and PAR (R² = 0.32–0.63) affected the daily dynamics of T, ET and T/ET; however, soil water content (SWC) had no significant effect. Mature European beech trees showed more anisohydric behaviour and relatively stable T/ET, even under decreasing SWC. The results improve the understanding of ecosystem scale T, ET and T/ET intra-annual dynamics and environmental constraints in anisohydric mature European beech.

Climate-smart forestry (CSF) consists of an extensive framework of actions directed to mitigating and adapting to global climate change impacts on the resilience and productivity of forest ecosystems. This study investigates the impact of the pan-European 2018 drought on carbon exchange dynamics in typical highland and mountain forests in the Czech Republic, including two coniferous stands (Norway spruce at Bílý Kříž and Rajec) and one deciduous stand (European beech at Štítná). Our results show that the annual net ecosystem CO₂ uptake at Rajec decreased by 50% during the drought year in comparison to a reference year with normal climatic conditions. The Bílý Kříž stand is less affected by drought, as the local microclimate ensures sufficient water supply. The European beech forest at Štítná is most resilient against drought and its negative impacts — there we detect no differences in carbon exchange dynamics between the drought year and the reference year. We consider the matching of tree species to site conditions as crucial in the context of CSF, specifically regarding the stand response to water limitation and water supply and demand. Successively replacing spruce with beech trees in areas with high water demand but limited water supply, like Rajec, will support the goals of CSF.