The occurrence of carbonatites in oceanic settings is very rare if compared with their continental counterpart, having been reported only in Cape Verde and Canary Islands. This paper provides an overview of the main geochemical characteristics of oceanic carbonatites, around which many debates still exist regarding their petrogenesis. We present new data on trace elements in minerals and whole-rock, together with the first noble gases isotopic study (He, Ne, Ar) in apatite, calcite, and clinopyroxene from Fuerteventura carbonatites (Canary Islands). Trace elements show a similar trend as Cape Verde carbonatites, almost tracing the same patterns on multi-element and REE abundance diagrams. ³He/⁴He isotopic ratios of Fuerteventura carbonatites reflect a shallow (sub-continental lithospheric mantle, SCLM) He signature in their petrogenesis, and they clearly differ from Cape Verde carbonatites, i.e., fluids from a deep and low degassed mantle with a primitive plume-derived He signature are involved in their petrogenesis.