Nicholas Stephanopoulos

Dr. Nicholas Stephanopoulos

orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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16 November 2018 in Science
Verified
Journal Article
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RFRonit Freeman
Ronit Freeman
MHMing Han
Ming Han
ZÁZaida Álvarez
Zaida Álvarez
JLJacob A. Lewis
Jacob A. Lewis
JWJames R. Wester
James R. Wester
SSSamuel I. Stupp
Samuel I. Stupp
Chemically reversible hydrogels: The dynamic reorganization of some cellular biopolymers in response to signals has inspired efforts to create artificial materials with similar properties. Freeman et al. created hydrogels based on peptide amphiphiles that can bear DNA strands that assemble into superstructures and that disassemble in response to chemical triggers. The addition of DNA conjugates induced transitions from micelles to fibers and bundles of fibers. The resulting hydrogels were used as an extracellular matrix mimic for cultured cells. Switching the hydrogel between states also switched astrocytes between their reactive and naïve phenotypes. Science , this issue p. 808

31 March 2022 in Nature Materials
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Journal Article
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Allen LiuAllen Liu
Allen Liu
EAEric A. Appel
Eric A. Appel
PAPaul D. Ashby
Paul D. Ashby
Brendon M. BakerBrendon M. Baker
Brendon M. Baker
EFElisa Franco
Elisa Franco
OCOvijit Chaudhuri
Ovijit Chaudhuri

5 March 2019 in ACS Nano
Verified
Journal Article
Closed access
YXYang Xu
Yang Xu
SJShuoxing Jiang
Shuoxing Jiang
CSChad R. Simmons
Chad R. Simmons
RNRaghu Pradeep Narayanan
Raghu Pradeep Narayanan
FZFei Zhang
Fei Zhang
NSNicholas Stephanopoulos
Nicholas Stephanopoulos

17 May 2024 in Science
Verified
Journal Article
Closed access
HLHao Liu
Hao Liu
MMMichael Matthies
Michael Matthies
JRJohn Russo
John Russo
LRLorenzo Rovigatti
Lorenzo Rovigatti
RNRaghu Pradeep Narayanan
Raghu Pradeep Narayanan
PŠPetr Šulc
Petr Šulc
Sophisticated statistical mechanics approaches and human intuition have demonstrated the possibility of self-assembling complex lattices or finite-size constructs. However, attempts so far have mostly only been successful in silico and often fail in experiment because of unpredicted traps associated with kinetic slowing down (gelation, glass transition) and competing ordered structures. Theoretical predictions also face the difficulty of encoding the desired interparticle interaction potential with the experimentally available nano- and micrometer-sized particles. To overcome these issues, we combine SAT assembly (a patchy-particle interaction design algorithm based on constrained optimization) with coarse-grained simulations of DNA nanotechnology to experimentally realize trap-free self-assembly pathways. We use this approach to assemble a pyrochlore three-dimensional lattice, coveted for its promise in the construction of optical metamaterials, and characterize it with small-angle x-ray scattering and scanning electron microscopy visualization.

10 December 2019 in Journal of the American Chemical Society
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Journal Article
Open access
ABAlex Buchberger
Alex Buchberger
CSChad R. Simmons
Chad R. Simmons
NFNour Eddine Fahmi
Nour Eddine Fahmi
RFRonit Freeman
Ronit Freeman
NSNicholas Stephanopoulos
Nicholas Stephanopoulos
DNA and peptides are two of the most commonly used biomolecules for building self-assembling materials, but few ex-amples exist of hybrid nanostructures that contain both components. Here we report the modification of two peptides that comprise a coiled-coil heterodimer pair with unique DNA handles in order to link DNA origami nanostructures bear-ing complementary strands into micrometer-long one-dimensional arrays. We probed the effect of number of coils on self-assembly and demonstrated the formation of self-assembled structures through multiple routes: one-post assembly, formation of dimers and trimers and an alternating copolymer of two different origami bundles, and stepwise assembly of purified structures with coiled-coil conjugates. Our results demonstrate the successful merging of two distinct self-assembly modes to create hybrid bionanomaterials expected to have a range of potential applications in the future.

22 November 2018 in Organic & Biomolecular Chemistry
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Journal Article
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TMTara MacCulloch
Tara MacCulloch
ABAlex Buchberger
Alex Buchberger
NSNicholas Stephanopoulos
Nicholas Stephanopoulos
Peptide–oligonucleotide conjugates (POCs) are covalent constructs that link a molecule like DNA to a synthetic peptide sequences.