Thomas Payne

Dr. Thomas Payne


Research Focus & Metrics

Academic Career Length

40Years (1987-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 August 2010 in PLOS Genetics
Verified
Journal Article
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NSNancy L Saccone
Nancy L Saccone
RCRobert C Culverhouse
Robert C Culverhouse
TSTae-Hwi Schwantes-An
Tae-Hwi Schwantes-An
DCDale S Cannon
Dale S Cannon
XCXiangning Chen
Xiangning Chen
LBLaura J Bierut
Laura J Bierut
Recently, genetic association findings for nicotine dependence, smoking behavior, and smoking-related diseases converged to implicate the chromosome 15q25.1 region, which includes the CHRNA5-CHRNA3-CHRNB4 cholinergic nicotinic receptor subunit genes. In particular, association with the nonsynonymous CHRNA5 SNP rs16969968 and correlates has been replicated in several independent studies. Extensive genotyping of this region has suggested additional statistically distinct signals for nicotine dependence, tagged by rs578776 and rs588765. One goal of the Consortium for the Genetic Analysis of Smoking Phenotypes (CGASP) is to elucidate the associations among these markers and dichotomous smoking quantity (heavy versus light smoking), lung cancer, and chronic obstructive pulmonary disease (COPD). We performed a meta-analysis across 34 datasets of European-ancestry subjects, including 38,617 smokers who were assessed for cigarettes-per-day, 7,700 lung cancer cases and 5,914 lung-cancer-free controls (all smokers), and 2,614 COPD cases and 3,568 COPD-free controls (all smokers). We demonstrate statistically independent associations of rs16969968 and rs588765 with smoking (mutually adjusted p-values<10−35 and <10−8 respectively). Because the risk alleles at these loci are negatively correlated, their association with smoking is stronger in the joint model than when each SNP is analyzed alone. Rs578776 also demonstrates association with smoking after adjustment for rs16969968 (p<10−6). In models adjusting for cigarettes-per-day, we confirm the association between rs16969968 and lung cancer (p<10−20) and observe a nominally significant association with COPD (p = 0.01); the other loci are not significantly associated with either lung cancer or COPD after adjusting for rs16969968. This study provides strong evidence that multiple statistically distinct loci in this region affect smoking behavior. This study is also the first report of association between rs588765 (and correlates) and smoking that achieves genome-wide significance; these SNPs have previously been associated with mRNA levels of CHRNA5 in brain and lung tissue. Nicotine binds to cholinergic nicotinic receptors, which are composed of a variety of subunits. Genetic studies for smoking behavior and smoking-related diseases have implicated a genomic region that encodes the alpha5, alpha3, and beta4 subunits. We examined genetic data across this region for over 38,000 smokers, a subset of which had been assessed for lung cancer or chronic obstructive pulmonary disease. We demonstrate strong evidence that there are at least two statistically independent loci in this region that affect risk for heavy smoking. One of these loci represents a change in the protein structure of the alpha5 subunit. This work is also the first to report strong evidence of association between smoking and a group of genetic variants that are of biological interest because of their links to expression of the alpha5 cholinergic nicotinic receptor subunit gene. These advances in understanding the genetic influences on smoking behavior are important because of the profound public health burdens caused by smoking and nicotine addiction.

1 May 1994 in Addictive Behaviors
Verified
Journal Article
Closed access
TPThomas Payne
Thomas Payne
PSPatrick O. Smith
Patrick O. Smith
LMLance M. McCracken
Lance M. McCracken
WMW.Clinton McSherry
W.Clinton McSherry
MAMartin M. Antony
Martin M. Antony

24 March 2005 in Human Molecular Genetics
Verified
Journal Article
Open access
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MLMing D. Li
Ming D. Li
JBJoke Beuten
Joke Beuten
JMJennie Z. Ma
Jennie Z. Ma
TPThomas Payne
Thomas Payne
XLXiang-Yang Lou
Xiang-Yang Lou
RERobert C. Elston
Robert C. Elston
We tested six single nucleotide polymorphisms (SNPs) in the α4 subunit gene (CHRNA4) and four SNPs in the β2 subunit gene (CHRNB2) of nicotinic acetylcholine receptors (nAChRs) for association with nicotine dependence (ND), which was assessed by smoking quantity (SQ), the heaviness of smoking index (HSI) and the Fagerström test for ND (FTND) in 2037 subjects from 602 nuclear families of either European-American (EA) or African-American (AA) ancestry. Analysis of the six SNPs within CHRNA4 demonstrated that in the EA sample SNPs rs2273504 and rs1044396 are significantly associated with the adjusted SQ and FTND score, respectively. In the AA samples, SNPs rs3787137 and rs2236196 are each significantly associated with at least two adjusted ND measures. Association of rs2236196 with the adjusted HSI and FTND scores in the AA samples remained significant after correction for multiple testing. Furthermore, analysis revealed gender- and ethnic-specific associations for several SNPs with ND measures in both ethnic samples; however, only the association of SNP rs2236196 with the three adjusted ND measures remained significant after correcting for multiple testing in the AA female samples. Haplotype analysis of rs2273505–rs2273504–rs2236196 showed significant association after Bonferroni correction of a C–G–G haplotype (53.4%) with three adjusted ND measures in samples from the AA females. A similar analysis for the four SNPs within CHRNB2 did not reveal significant association with the three ND measures. In summary, our findings provide convincing evidence for the involvement of the nAChR α4 subunit, but not of the nAChR β2 subunit, in nicotine addiction.

14 December 2005 in Neuropsychopharmacology
Verified
Journal Article
Closed access
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JBJoke Beuten
Joke Beuten
TPThomas Payne
Thomas Payne
JMJennie Z Ma
Jennie Z Ma
MLMing D Li
Ming D Li

Clifton AddisonClifton Addison
Clifton Addison
BCBrenda W. Campbell-Jenkins
Brenda W. Campbell-Jenkins
DSDaniel F. Sarpong
Daniel F. Sarpong
JKJeffery Kibler
Jeffery Kibler
MSMadhu Singh
Madhu Singh
HTHerman Taylor
Herman Taylor
This study sought to establish the psychometric properties of a Coping Strategies Inventory Short Form (CSISF) by examining coping skills in the Jackson Heart Study cohort. We used exploratory and confirmatory factor analysis, Pearson’s correlation, and Cronbach Alpha to examine reliability and validity in the CSI-SF that solicited responses from 5302 African American men and women between the ages of 35 and 84. One item was dropped from the 16-item CSI-SF, making it a 15-item survey. No significant effects were found for age and gender, strengthening the generalizability of the CSI-SF. The internal consistency reliability analysis revealed reliability between alpha = 0.58-0.72 for all of the scales, and all of the fit indices used to examine the CSI-SF provided support for its use as an adequate measure of coping. This study provides empirical support for utilizing this instrument in future efforts to understand the role of coping in moderating health outcomes.

19 March 2008 in Neuropsychopharmacology
Verified
Journal Article
Closed access
WHWeihua Huang
Weihua Huang
TPThomas Payne
Thomas Payne
JMJennie Z Ma
Jennie Z Ma
JBJoke Beuten
Joke Beuten
RDRandolph T Dupont
Randolph T Dupont
MLMing D Li
Ming D Li