Rafael Aldabe

Dr. Rafael Aldabe

orcid

Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 August 2021 in JHEP Reports
Verified
Journal Article
Open access
SMSheila Maestro
Sheila Maestro
NWNicholas D. Weber
Nicholas D. Weber
NZNerea Zabaleta
Nerea Zabaleta
RARafael Aldabe
Rafael Aldabe
GGGloria Gonzalez-Aseguinolaza
Gloria Gonzalez-Aseguinolaza
Gene therapy is becoming an increasingly valuable tool to treat many genetic diseases with no or limited treatment options. This is the case for hundreds of monogenic metabolic disorders of hepatic origin, for which liver transplantation remains the only cure. Furthermore, the liver contains 10–15% of the body’s total blood volume, making it ideal for use as a factory to secrete proteins into the circulation. In recent decades, an expanding toolbox has become available for liver-directed gene delivery. Although viral vectors have long been the preferred approach to target hepatocytes, an increasing number of non-viral vectors are emerging as highly efficient vehicles for the delivery of genetic material. Herein, we review advances in gene delivery vectors targeting the liver and more specifically hepatocytes, covering strategies based on gene addition and gene editing, as well as the exciting results obtained with the use of RNA as a therapeutic molecule. Moreover, we will briefly summarise some of the limitations of current liver-directed gene therapy approaches and potential ways of overcoming them.

15 September 2008 in Oncogene
Verified
Journal Article
Closed access
AAA Ametzazurra
A Ametzazurra
ELEsther Larrea
Esther Larrea
MCM P Civeira
M P Civeira
JPJ Prieto
J Prieto
RARafael Aldabe
Rafael Aldabe

30 September 2014 in PLOS ONE
Verified
Journal Article
Open access
PDF file
AEAlberto Elosegui-Artola
Alberto Elosegui-Artola
AJAlvaro Jorge-Peñas
Alvaro Jorge-Peñas
OMOihana Moreno-Arotzena
Oihana Moreno-Arotzena
AOAmaia Oregi
Amaia Oregi
MLMarta Lasa
Marta Lasa
RARafael Aldabe
Rafael Aldabe
Actin stress fibers (SFs) detect and transmit forces to the extracellular matrix through focal adhesions (FAs), and molecules in this pathway determine cellular behavior. Here, we designed two different computational tools to quantify actin SFs and the distribution of actin cytoskeletal proteins within a normalized cellular morphology. Moreover, a systematic cell response comparison between the control cells and those with impaired actin cytoskeleton polymerization was performed to demonstrate the reliability of the tools. Indeed, a variety of proteins that were present within the string beginning at the focal adhesions (vinculin) up to the actin SFs contraction (non-muscle myosin II (NMMII)) were analyzed. Finally, the software used allows for the quantification of the SFs based on the relative positions of FAs. Therefore, it provides a better insight into the cell mechanics and broadens the knowledge of the nature of SFs.

1 April 2020 in Neurobiology of Disease
Verified
Journal Article
Open access
RVRodrigo Vinueza-Gavilanes
Rodrigo Vinueza-Gavilanes
IÍIgnacio Íñigo-Marco
Ignacio Íñigo-Marco
LLLaura Larrea
Laura Larrea
MLMarta Lasa
Marta Lasa
BCBeatriz Carte
Beatriz Carte
MAMontserrat Arrasate
Montserrat Arrasate
Alpha-synuclein (aSyn) protein levels are sufficient to drive Parkinson's disease (PD) and other synucleinopathies. Despite the biomedical/therapeutic potential of aSyn protein regulation, little is known about mechanisms that limit/control aSyn levels. Here, we investigate the role of a post-translational modification, N-terminal acetylation, in aSyn neurotoxicity. N-terminal acetylation occurs in all aSyn molecules and has been proposed to determine its lipid binding and aggregation capacities; however, its effect in aSyn stability/neurotoxicity has not been evaluated. We generated N-terminal mutants that alter or block physiological aSyn N-terminal acetylation in wild-type or pathological mutant E46K aSyn versions and confirmed N-terminal acetylation status by mass spectrometry. By optical pulse-labeling in living primary neurons we documented a reduced half-life and accumulation of aSyn N-terminal mutants. To analyze the effect of N-terminal acetylation mutants in neuronal toxicity we took advantage of a neuronal model where aSyn toxicity was scored by longitudinal survival analysis. Salient features of aSyn neurotoxicity were previously investigated with this approach. aSyn-dependent neuronal death was recapitulated either by higher aSyn protein levels in the case of WT aSyn, or by the combined effect of protein levels and enhanced neurotoxicity conveyed by the E46K mutation. aSyn N-terminal mutations decreased E46K aSyn-dependent neuronal death both by reducing protein levels and, importantly, by reducing the intrinsic E46K aSyn toxicity, being the D2P mutant the least toxic. Together, our results illustrate that the N-terminus determines, most likely through its acetylation, aSyn protein levels and toxicity, identifying this modification as a potential therapeutic target.

21 April 2017 in Oncotarget
Verified
Journal Article
Open access
PDF file
LNLeire Neri
Leire Neri
MLMarta Lasa
Marta Lasa
AEAlberto Elosegui-Artola
Alberto Elosegui-Artola
DDDelia D'AVola
Delia D'AVola
BCBeatriz Carte
Beatriz Carte
RARafael Aldabe
Rafael Aldabe
NatB-mediated protein N-α-terminal acetylation is a potential therapeutic target in hepatocellular carcinoma NatB-mediated protein N-α-terminal acetylation is a potential therapeutic target in hepatocellular carcinoma

15 September 2016 in The Journal of Immunology
Verified
Journal Article
Open access
PDF file
IGIrene Gil-Farina
Irene Gil-Farina
MSMarianna Di Scala
Marianna Di Scala
ESEduardo Salido
Eduardo Salido
ELEsperanza López-Franco
Esperanza López-Franco
EREstefania Rodríguez-García
Estefania Rodríguez-García
GGGloria Gonzalez-Aseguinolaza
Gloria Gonzalez-Aseguinolaza
The etiopathogenesis of autoimmune hepatitis (AIH) remains poorly understood. In this study, we sought to develop an animal model of human AIH to gain insight into the immunological mechanisms driving this condition. C57BL/6 mice were i.v. injected with adeno-associated viral vectors encoding murine IL-12 or luciferase under the control of a liver-specific promoter. Organ histology, response to immunosuppressive therapy, and biochemical and immunological parameters, including Ag-specific humoral and cellular response, were analyzed. Mechanistic studies were carried out using genetically modified mice and depletion of lymphocyte subpopulations. Adeno-associated virus IL-12–treated mice developed histological, biochemical, and immunological changes resembling type 1 AIH, including marked and persistent liver mononuclear cell infiltration, hepatic fibrosis, hypergammaglobulinemia, anti-nuclear and anti–smooth muscle actin Abs, and disease remission with immunosuppressive drugs. Interestingly, transgenic IL-12 was short-lived, but endogenous IL-12 expression was induced, and both IL-12 and IFN-γ remained elevated during the entire study period. IFN-γ was identified as an essential mediator of liver damage, and CD4 and CD8 T cells but not NK, NKT, or B cells were essential executors of hepatic injury. Furthermore, both MHC class I and MHC class II expression was upregulated at the hepatocellular membrane, and induction of autoreactive liver-specific T cells was detected. Remarkably, although immunoregulatory mechanisms were activated, they only partially mitigated liver damage. Thus, low and transient expression of transgenic IL-12 in hepatocytes causes loss of tolerance to hepatocellular Ags, leading to chronic hepatitis resembling human AIH type 1. This model provides a practical tool to explore AIH pathogenesis and novel therapies.