Tai-Han Lin

Dr. Tai-Han Lin

orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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24 January 2025 in Journal of Medical Internet Research
Verified
Journal Article
Open access
TLTai-Han Lin
Tai-Han Lin
HCHsing-yi Chung
Hsing-yi Chung
MJMing-Jr Jian
Ming-Jr Jian
CCChih-Kai Chang
Chih-Kai Chang
HLHung-Hsin Lin
Hung-Hsin Lin
Hung-Sheng ShangHung-Sheng Shang
Hung-Sheng Shang
Background: Sepsis, a critical global health challenge, accounted for approximately 20% of worldwide deaths in 2017. Although the Sequential Organ Failure Assessment (SOFA) score standardizes the diagnosis of organ dysfunction, early sepsis detection remains challenging due to its insidious symptoms. Current diagnostic methods, including clinical assessments and laboratory tests, frequently lack the speed and specificity needed for timely intervention, particularly in vulnerable populations such as older adults, intensive care unit (ICU) patients, and those with compromised immune systems. While bacterial cultures remain vital, their time-consuming nature and susceptibility to false negatives limit their effectiveness. Even promising existing machine learning approaches are restricted by reliance on complex clinical factors that could delay results, underscoring the need for faster, simpler, and more reliable diagnostic strategies. Objective: This study introduces innovative machine learning models using complete blood count with differential (CBC+DIFF) data—a routine, minimally invasive test that assesses immune response through blood cell measurements, critical for sepsis identification. The primary objective was to implement this model within an artificial intelligence–clinical decision support system (AI-CDSS) to enhance early sepsis detection and management in critical care settings. Methods: This retrospective study at Tri-Service General Hospital (September to December 2023) analyzed 746 ICU patients with suspected pneumonia-induced sepsis (supported by radiographic evidence and a SOFA score increase of ≥2 points), alongside 746 stable outpatients as controls. Sepsis infection sources were confirmed through positive sputum, blood cultures, or FilmArray results. The dataset incorporated both basic hematological factors and advanced neutrophil characteristics (side scatter light intensity, cytoplasmic complexity, and neutrophil-to-lymphocyte ratio), with data from September to November used for training and data from December used for validation. Machine learning models, including light gradient boosting machine (LGBM), random forest classifier, and gradient boosting classifier, were developed using CBC+DIFF data and were assessed using metrics such as area under the curve, sensitivity, and specificity. The best-performing model was integrated into the AI-CDSS, with its implementation supported through workshops and training sessions. Results: Pathogen identification in ICU patients found 243 FilmArray-positive, 411 culture-positive, and 92 undetected cases, yielding a final dataset of 654 (43.8%) sepsis cases out of 1492 total cases. The machine learning models demonstrated high predictive accuracy, with LGBM achieving the highest area under the curve (0.90), followed by the random forest classifier (0.89) and gradient boosting classifier (0.88). The best-performing LGBM model was selected and integrated as the core of our AI-CDSS, which was built on a web interface to facilitate rapid sepsis risk assessment using CBC+DIFF data. Conclusions: This study demonstrates that by providing streamlined predictions using CBC+DIFF data without requiring extensive clinical parameters, the AI-CDSS can be seamlessly integrated into clinical workflows, enhancing rapid, accurate identification of sepsis and improving patient care and treatment timeliness.

7 November 2024 in Journal of Medical Internet Research
Verified
Journal Article
Open access
MJMing-Jr Jian
Ming-Jr Jian
TLTai-Han Lin
Tai-Han Lin
HCHsing-yi Chung
Hsing-yi Chung
CCChih-Kai Chang
Chih-Kai Chang
CPCherng-Lih Perng
Cherng-Lih Perng
Hung-Sheng ShangHung-Sheng Shang
Hung-Sheng Shang
Background: The rising prevalence and swift spread of multidrug-resistant gram-negative bacteria (MDR-GNB), especially Klebsiella pneumoniae (KP), present a critical global health threat highlighted by the World Health Organization, with mortality rates soaring approximately 50% with inappropriate antimicrobial treatment. Objective: This study aims to advance a novel strategy to develop an artificial intelligence-clinical decision support system (AI-CDSS) that combines machine learning (ML) with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS), aiming to significantly improve the accuracy and speed of diagnosing antibiotic resistance, directly addressing the grave health risks posed by the widespread dissemination of pan drug-resistant gram-negative bacteria across numerous countries. Methods: A comprehensive dataset comprising 165,299 bacterial specimens and 11,996 KP isolates was meticulously analyzed using MALDI-TOF MS technology. Advanced ML algorithms were harnessed to sculpt predictive models that ascertain resistance to quintessential antibiotics, particularly levofloxacin and ciprofloxacin, by using the amassed spectral data. Results: Our ML models revealed remarkable proficiency in forecasting antibiotic resistance, with the random forest classifier emerging as particularly effective in predicting resistance to both levofloxacin and ciprofloxacin, achieving the highest area under the curve of 0.95. Performance metrics across different models, including accuracy, sensitivity, specificity, positive predictive value, negative predictive value, and F1-score, were detailed, underlining the potential of these algorithms in aiding the development of precision treatment strategies. Conclusions: This investigation highlights the synergy between MALDI-TOF MS and ML as a beacon of hope against the escalating threat of antibiotic resistance. The advent of AI-CDSS heralds a new era in clinical diagnostics, promising a future in which rapid and accurate resistance prediction becomes a cornerstone in combating infectious diseases. Through this innovative approach, we answered the challenge posed by KP and other multidrug-resistant pathogens, marking a significant milestone in our journey toward global health security.

4 September 2024 in Journal of Medical Internet Research
Verified
Journal Article
Open access
TLTai-Han Lin
Tai-Han Lin
HCHsing-yi Chung
Hsing-yi Chung
MJMing-Jr Jian
Ming-Jr Jian
CCChih-Kai Chang
Chih-Kai Chang
CPCherng-Lih Perng
Cherng-Lih Perng
Hung-Sheng ShangHung-Sheng Shang
Hung-Sheng Shang
Background: Breast cancer is a leading global health concern, necessitating advancements in recurrence prediction and management. The development of an artificial intelligence (AI)–based clinical decision support system (AI-CDSS) using ChatGPT addresses this need with the aim of enhancing both prediction accuracy and user accessibility. Objective: This study aims to develop and validate an advanced machine learning model for a web-based AI-CDSS application, leveraging the question-and-answer guidance capabilities of ChatGPT to enhance data preprocessing and model development, thereby improving the prediction of breast cancer recurrence. Methods: This study focused on developing an advanced machine learning model by leveraging data from the Tri-Service General Hospital breast cancer registry of 3577 patients (2004-2016). As a tertiary medical center, it accepts referrals from four branches—3 branches in the northern region and 1 branch on an offshore island in our country—that manage chronic diseases but refer complex surgical cases, including breast cancer, to the main center, enriching our study population’s diversity. Model training used patient data from 2004 to 2012, with subsequent validation using data from 2013 to 2016, ensuring comprehensive assessment and robustness of our predictive models. ChatGPT is integral to preprocessing and model development, aiding in hormone receptor categorization, age binning, and one-hot encoding. Techniques such as the synthetic minority oversampling technique address the imbalance of data sets. Various algorithms, including light gradient-boosting machine, gradient boosting, and extreme gradient boosting, were used, and their performance was evaluated using metrics such as the area under the curve, accuracy, sensitivity, and F1-score. Results: The light gradient-boosting machine model demonstrated superior performance, with an area under the curve of 0.80, followed closely by the gradient boosting and extreme gradient boosting models. The web interface of the AI-CDSS tool was effectively tested in clinical decision-making scenarios, proving its use in personalized treatment planning and patient involvement. Conclusions: The AI-CDSS tool, enhanced by ChatGPT, marks a significant advancement in breast cancer recurrence prediction, offering a more individualized and accessible approach for clinicians and patients. Although promising, further validation in diverse clinical settings is recommended to confirm its efficacy and expand its use.

6 June 2025 in Diagnostics
Verified
Journal Article
Open access
PDF file
HLHung-Hsin Lin
Hung-Hsin Lin
HCHsing-yi Chung
Hsing-yi Chung
TLTai-Han Lin
Tai-Han Lin
CCChih-Kai Chang
Chih-Kai Chang
CPCherng-Lih Perng
Cherng-Lih Perng
MJMing-Jr Jian
Ming-Jr Jian
Background/Objectives: Emerging infectious diseases pose significant global threats due to their rapid transmission, limited therapeutic options, and profound socioeconomic impact. Conventional diagnostic techniques that rely on sequencing and polymerase chain reactions (PCR) frequently lack the speed necessary to efficiently respond to rapidly evolving pathogens. This study describes the development of BioInnovate AI to overcome these limitations using machine learning to expedite PCR assay development. Methods: The ability of BioInnovate AI to predict optimal PCR reagents across multiple pathogens was assessed. Additionally, random forest classifier, light gradient boosting machine (LGBM), and gradient boosting classifier models were evaluated for their ability to predict effective PCR primer–probe combinations. Performance metrics, including the area under the curve (AUC), sensitivity, specificity, accuracy, and F1 score, were assessed to identify the optimal model for platform integration. Results: All machine learning models performed well, with the LGBM model achieving the highest metrics (AUC: 0.97, sensitivity: 0.93, specificity: 0.91). BioInnovate AI significantly reduced PCR assay development time by approximately 90%, enabling rapid design and reagent optimization for multiple pathogens. Conclusions: BioInnovate AI provides a rapid, accurate, and efficient method for PCR reagent design, significantly enhancing global diagnostic preparedness by optimizing primers and probes for the timely detection of infectious diseases.

21 February 2021 in Cancers
Verified
Journal Article
Open access
PDF file
TLTai-Han Lin
Tai-Han Lin
HGHong-Wei Gao
Hong-Wei Gao
GLGuo-Shiou Liao
Guo-Shiou Liao
JYJyh-Cherng Yu
Jyh-Cherng Yu
MDMing-Shen Dai
Ming-Shen Dai
CYCheng-Ping Yu
Cheng-Ping Yu
Background: To realize the association between stratified expression levels of ER and PgR and long-term prognosis of breast cancer patients who received adjuvant hormone therapy, this study aimed to propose better prognostic cut-off levels for estrogen receptor (ER) and progesterone receptor (PgR). Methods: Patients who received adjuvant hormone therapy after surgical intervention were selected. The ER and PgR status and their effects on breast cancer-specific survival (BCSS) and disease-free survival (DFS) over 5 and 10 years were evaluated. Next, subgroups were generated based on ER and PgR expression percentage and Allred scores. Survival curves were constructed using the Kaplan–Meier method. Results: ER and PgR expression were significantly associated with better prognosis in 5 years, whereas only PgR expression was significantly associated during the 10-year follow-up. The optimal cut-off values for better 5-year BCSS were ER > 50%; ER Allred score > 7; PgR ≥ 1%; or PgR Allred score ≥ 3; the corresponding values for DFS were ER > 40%; ER Allred score > 6; PgR > 10%; or PgR Allred score ≥ 3. In the long-term follow-up, PgR of > 50% or Allred score of > 5 carriers revealed a better prognosis of both BCSS and DFS. Conclusion: Patients with a PgR expression > 50% or an Allred score > 5 exhibited better 10-year BCSS and DFS.

4 March 2024 in JMIR Preprints
Verified
Preprint
Open access
MJMing-Jr Jian
Ming-Jr Jian
TLTai-Han Lin
Tai-Han Lin
HCHsing-yi Chung
Hsing-yi Chung
CCChih-Kai Chang
Chih-Kai Chang
CPCherng-Lih Perng
Cherng-Lih Perng
Hung-Sheng ShangHung-Sheng Shang
Hung-Sheng Shang
BACKGROUND The rising prevalence and swift spread of multidrug-resistant gram-negative bacteria (MDR-GNB), especially Klebsiella pneumoniae (KP), present a critical global health threat highlighted by the World Health Organization, with mortality rates soaring approximately 50% with inappropriate antimicrobial treatment. OBJECTIVE This study aims to advance a novel strategy to develop an artificial intelligence-clinical decision support system (AI-CDSS) that combines machine learning (ML) with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS), aiming to significantly improve the accuracy and speed of diagnosing antibiotic resistance, directly addressing the grave health risks posed by the widespread dissemination of pan drug-resistant gram-negative bacteria across numerous countries. METHODS A comprehensive dataset comprising 165,299 bacterial specimens and 11,996 KP isolates was meticulously analyzed using MALDI-TOF MS technology. Advanced ML algorithms were harnessed to sculpt predictive models that ascertain resistance to quintessential antibiotics, particularly levofloxacin and ciprofloxacin, by using the amassed spectral data. RESULTS Our ML models revealed remarkable proficiency in forecasting antibiotic resistance, with the random forest classifier emerging as particularly effective in predicting resistance to both levofloxacin and ciprofloxacin, achieving the highest area under the curve of 0.95. Performance metrics across different models, including accuracy, sensitivity, specificity, positive predictive value, negative predictive value, and F1-score, were detailed, underlining the potential of these algorithms in aiding the development of precision treatment strategies. CONCLUSIONS This investigation highlights the synergy between MALDI-TOF MS and ML as a beacon of hope against the escalating threat of antibiotic resistance. The advent of AI-CDSS heralds a new era in clinical diagnostics, promising a future in which rapid and accurate resistance prediction becomes a cornerstone in combating infectious diseases. Through this innovative approach, we answered the challenge posed by KP and other multidrug-resistant pathogens, marking a significant milestone in our journey toward global health security.