Ryan Pace

Dr. Ryan Pace

University of Idaho
orcid

Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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23 November 2011 in Nature
Verified
Journal Article
Open access
PDF file
MGMiodrag Grbic
Miodrag Grbic
TLThomas Van Leeuwen
Thomas Van Leeuwen
RCRichard M. Clark
Richard M. Clark
SRStephane Rombauts
Stephane Rombauts
PRPierre Rouzé
Pierre Rouzé
YPYves Van de Peer
Yves Van de Peer
The spider mite Tetranychus urticae is a cosmopolitan agricultural pest with an extensive host plant range and an extreme record of pesticide resistance. Here we present the completely sequenced and annotated spider mite genome, representing the first complete chelicerate genome. At 90 megabases T. urticae has the smallest sequenced arthropod genome. Compared with other arthropods, the spider mite genome shows unique changes in the hormonal environment and organization of the Hox complex, and also reveals evolutionary innovation of silk production. We find strong signatures of polyphagy and detoxification in gene families associated with feeding on different hosts and in new gene families acquired by lateral gene transfer. Deep transcriptome analysis of mites feeding on different plants shows how this pest responds to a changing host environment. The T. urticae genome thus offers new insights into arthropod evolution and plant–herbivore interactions, and provides unique opportunities for developing novel plant protection strategies.

23 February 2021 in mBio
Verified
Journal Article
Open access
PDF file
RPRyan Pace
Ryan Pace
JWJanet Williams
Janet Williams
KJKirsi M. Järvinen
Kirsi M. Järvinen
MBMandy B. Belfort
Mandy B. Belfort
CPChristina D. W. Pace
Christina D. W. Pace
MMMichelle McGuire
Michelle McGuire
Whether mother-to-infant SARS-CoV-2 transmission can occur during breastfeeding and, if so, whether the benefits of breastfeeding outweigh this risk during maternal COVID-19 illness remain important questions. Using RT-qPCR, we did not detect SARS-CoV-2 RNA in any milk sample (n = 37) collected from 18 women following COVID-19 diagnosis. Although we detected evidence of viral RNA on 8 out of 70 breast skin swabs, only one was considered a conclusive positive result. In contrast, 76% of the milk samples collected from women with COVID-19 contained SARS-CoV-2-specific IgA, and 80% had SARS-CoV-2-specific IgG. In addition, 62% of the milk samples were able to neutralize SARS-CoV-2 infectivity in vitro, whereas milk samples collected prior to the COVID-19 pandemic were unable to do so. Taken together, our data do not support mother-to-infant transmission of SARS-CoV-2 via milk. Importantly, milk produced by infected mothers is a beneficial source of anti-SARS-CoV-2 IgA and IgG and neutralizes SARS-CoV-2 activity. These results support recommendations to continue breastfeeding during mild-to-moderate maternal COVID-19 illness. IMPORTANCE Results from prior studies assaying human milk for the presence of SARS-CoV-2, the causative virus of COVID-19, have suggested milk may act as a potential vehicle for mother-to-child transmission. Most previous studies are limited because they followed only a few participants, were cross-sectional, and/or failed to report how milk was collected and/or analyzed. As such, considerable uncertainty remains regarding whether human milk is capable of transmitting SARS-CoV-2 from mother to child. Here, we report that repeated milk samples collected from 18 women following COVID-19 diagnosis did not contain SARS-CoV-2 RNA; however, risk of transmission via breast skin should be further evaluated. Importantly, we found that milk produced by infected mothers is a source of anti-SARS-CoV-2 IgA and IgG and neutralizes SARS-CoV-2 activity. These results support recommendations to continue breastfeeding during mild-to-moderate maternal COVID-19 illness as milk likely provides specific immunologic benefits to infants.

16 December 2020 in Scientific Reports
Verified
Journal Article
Open access
PDF file
MSMaxim D. Seferovic
Maxim D. Seferovic
MMMahmoud Mohammad
Mahmoud Mohammad
RPRyan Pace
Ryan Pace
MEMelinda Engevik
Melinda Engevik
JVJames Versalovic
James Versalovic
Kjersti AagaardKjersti Aagaard
Kjersti Aagaard
Human milk is the optimal nutrition source for infants, and oligosaccharides represent the third most abundant component in milk after lactose and fat. Human milk oligosaccharides (HMO) are favorable macromolecules which are, interestingly, indigestible by the infant but serve as substrates for bacteria. Hypothesizing that the maternal diet itself might influence HMO composition, we sought to directly determine the effect maternal diet on HMO and the milk bacteria. Employing a human cross-over study design, we demonstrate that distinct maternal dietary carbohydrate and energy sources preferentially alter milk concentrations of HMO, including fucosylated species. We find significant associations between the concentration of HMO-bound fucose and the abundance of fucosidase (a bacterial gene that digests fucose moieties) harbored by milk bacteria. These studies reveal a successive mechanism by which the maternal diet during lactation alters milk HMO composition, which in turn shapes the functional milk microbiome prior to infant ingestion.

1 August 2019 in American Journal of Obstetrics and Gynecology
Verified
Journal Article
Closed access
MSMaxim D. Seferovic
Maxim D. Seferovic
RPRyan Pace
Ryan Pace
MCMatthew Carroll
Matthew Carroll
BBBenjamin Belfort
Benjamin Belfort
AMAngela M. Major
Angela M. Major
Kjersti AagaardKjersti Aagaard
Kjersti Aagaard

30 May 2020 in Maternal & Child Nutrition
Verified
Journal Article
Open access
KLKimberly A. Lackey
Kimberly A. Lackey
RPRyan Pace
Ryan Pace
JWJanet E. Williams
Janet E. Williams
LBLars Bode
Lars Bode
SDSharon M. Donovan
Sharon M. Donovan
MMMichelle McGuire
Michelle McGuire
The novel coronavirus SARS‐CoV‐2 has emerged as one of the most compelling and concerning public health challenges of our time. To address the myriad issues generated by this pandemic, an interdisciplinary breadth of research, clinical and public health communities has rapidly engaged to collectively find answers and solutions. One area of active inquiry is understanding the mode(s) of SARS‐CoV‐2 transmission. Although respiratory droplets are a known mechanism of transmission, other mechanisms are likely. Of particular importance to global health is the possibility of vertical transmission from infected mothers to infants through breastfeeding or consumption of human milk. However, there is limited published literature related to vertical transmission of any human coronaviruses (including SARS‐CoV‐2) via human milk and/or breastfeeding. Results of the literature search reported here (finalized on 17 April 2020) revealed a single study providing some evidence of vertical transmission of human coronavirus 229E; a single study evaluating presence of SARS‐CoV in human milk (it was negative); and no published data on MERS‐CoV and human milk. We identified 13 studies reporting human milk tested for SARS‐CoV‐2; one study (a non‐peer‐reviewed preprint) detected the virus in one milk sample, and another study detected SARS‐CoV‐2 specific IgG in milk. Importantly, none of the studies on coronaviruses and human milk report validation of their collection and analytical methods for use in human milk. These reports are evaluated here, and their implications related to the possibility of vertical transmission of coronaviruses (in particular, SARS‐CoV‐2) during breastfeeding are discussed.

1 October 2018 in Best Practice & Research Clinical Obstetrics & Gynaecology
Verified
Journal Article
Closed access
DCDerrick M. Chu
Derrick M. Chu
MSMaxim Seferovic
Maxim Seferovic
RPRyan Pace
Ryan Pace
Kjersti AagaardKjersti Aagaard
Kjersti Aagaard