Cheng-i Wei

Dr. Cheng-i Wei

orcid

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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16 April 2024 in Trends in Food Science & Technology
Verified
Journal Article
Closed access
PMpeihua ma
peihua ma
STShawn Tsai
Shawn Tsai
YHYiyang He
Yiyang He
XJXiaoxue Jia
Xiaoxue Jia
DZDongyang Zhen
Dongyang Zhen
CWCheng-i Wei
Cheng-i Wei

25 September 2018 in BMC Genomics
Verified
Journal Article
Open access
PDF file
YWYing Wu
Ying Wu
XMXianfeng Ma
Xianfeng Ma
Zhiyong PanZhiyong Pan
Zhiyong Pan
SKShiv D. Kale
Shiv D. Kale
YSYi Song
Yi Song
SXShunyuan Xiao
Shunyuan Xiao
Powdery mildew (PM) is one of the most important and widespread plant diseases caused by biotrophic fungi. Notably, while monocot (grass) PM fungi exhibit high-level of host-specialization, many dicot PM fungi display a broad host range. To understand such distinct modes of host-adaptation, we sequenced the genomes of four dicot PM biotypes belonging to Golovinomyces cichoracearum or Oidium neolycopersici. We compared genomes of the four dicot PM together with those of Blumeria graminis f.sp. hordei (both DH14 and RACE1 isolates), B. graminis f.sp. tritici, and Erysiphe necator infectious on barley, wheat and grapevine, respectively. We found that despite having a similar gene number (6620–6961), the PM genomes vary from 120 to 222 Mb in size. This high-level of genome size variation is indicative of highly differential transposon activities in the PM genomes. While the total number of genes in any given PM genome is only about half of that in the genomes of closely related ascomycete fungi, most (~ 93%) of the ascomycete core genes (ACGs) can be found in the PM genomes. Yet, 186 ACGs were found absent in at least two of the eight PM genomes, of which 35 are missing in some dicot PM biotypes, but present in the three monocot PM genomes, indicating remarkable, independent and perhaps ongoing gene loss in different PM lineages. Consistent with this, we found that only 4192 (3819 singleton) genes are shared by all the eight PM genomes, the remaining genes are lineage- or biotype-specific. Strikingly, whereas the three monocot PM genomes possess up to 661 genes encoding candidate secreted effector proteins (CSEPs) with families containing up to 38 members, all the five dicot PM fungi have only 116–175 genes encoding CSEPs with limited gene amplification. Compared to monocot (grass) PM fungi, dicot PM fungi have a much smaller effectorome. This is consistent with their contrasting modes of host-adaption: while the monocot PM fungi show a high-level of host specialization, which may reflect an advanced host-pathogen arms race, the dicot PM fungi tend to practice polyphagy, which might have lessened selective pressure for escalating an with a particular host.

18 June 2024 in Trends in Food Science & Technology
Verified
Journal Article
Closed access
XJXiaoxue Jia
Xiaoxue Jia
PMPeihua Ma
Peihua Ma
CWCheng-i Wei
Cheng-i Wei
Qin WangQin Wang
Qin Wang

30 October 2023 in Food Bioscience
Verified
Journal Article
Closed access
PMPeihua Ma
Peihua Ma
Xiaoxue JiaXiaoxue Jia
Xiaoxue Jia
WXWenhao Xu
Wenhao Xu
YHYiyang He
Yiyang He
KTKevin Tarwa
Kevin Tarwa
Qin WangQin Wang
Qin Wang

25 December 2023 in Trends in Food Science & Technology
Verified
Journal Article
Closed access
PMpeihua ma
peihua ma
Xiaoxue JiaXiaoxue Jia
Xiaoxue Jia
YHYiyang He
Yiyang He
JTJunheng Tao
Junheng Tao
Qin WangQin Wang
Qin Wang
CWCheng-i Wei
Cheng-i Wei

8 May 2024 in Nature Communications
Verified
Journal Article
Open access
PDF file
YMYimin Mao
Yimin Mao
PMpeihua ma
peihua ma
TLTangyuan Li
Tangyuan Li
HLHe Liu
He Liu
XZXinpeng Zhao
Xinpeng Zhao
LHLiangbing Hu
Liangbing Hu
Maintaining food safety and quality is critical for public health and food security. Conventional food preservation methods, such as pasteurization and dehydration, often change the overall organoleptic quality of the food products. Herein, we demonstrate a method that affects only a thin surface layer of the food, using beef as a model. In this method, Joule heating is generated by applying high electric power to a carbon substrate in ~2000 K. The beef surface in direct contact with the heating substrate is subjected to ultra-high temperature flash heating, leading to the formation of a microbe-inactivated, dehydrated layer of ~100 µm in thickness. Aerobic mesophilic bacteria, Enterobacteriaceae, yeast and mold on the treated samples are inactivated to a level below the detection limit and remained low during room temperature storage of 5 days. Meanwhile, the product quality, including visual appearance, texture, and nutrient level of the beef, remains mostly unchanged. In contrast, microorganisms grow rapidly on the untreated control samples, along with a rapid deterioration of the meat quality. This method might serve as a promising preservation technology for securing food safety and quality.