Dirk Faber

Prof. Dirk Faber

Biomedical Engineering and Physics Department, Amsterdam University Medical Centers, Amsterdam, The Netherlands
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Research Focus & Metrics

Academic Career Length

27Years (2000-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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12 October 2013 in Lasers in Medical Science
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Journal Article
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NBNienke Bosschaart
Nienke Bosschaart
GEGerda J. Edelman
Gerda J. Edelman
MAMaurice Aalders
Maurice Aalders
TLTon van Leeuwen
Ton van Leeuwen
Dirk FaberDirk Faber
Dirk Faber
Optical property measurements on blood are influenced by a large variety of factors of both physical and methodological origin. The aim of this review is to list these factors of influence and to provide the reader with optical property spectra (250–2,500 nm) for whole blood that can be used in the practice of biomedical optics (tabulated in the appendix). Hereto, we perform a critical examination and selection of the available optical property spectra of blood in literature, from which we compile average spectra for the absorption coefficient (μ a), scattering coefficient (μ s) and scattering anisotropy (g). From this, we calculate the reduced scattering coefficient (μ s′) and the effective attenuation coefficient (μ eff). In the compilation of μ a and μ s, we incorporate the influences of absorption flattening and dependent scattering (i.e. spatial correlations between positions of red blood cells), respectively. For the influence of dependent scattering on μ s, we present a novel, theoretically derived formula that can be used for practical rescaling of μ s to other haematocrits. Since the measurement of the scattering properties of blood has been proven to be challenging, we apply an alternative, theoretical approach to calculate spectra for μ s and g. Hereto, we combine Kramers–Kronig analysis with analytical scattering theory, extended with Percus–Yevick structure factors that take into account the effect of dependent scattering in whole blood. We argue that our calculated spectra may provide a better estimation for μ s and g (and hence μ s′ and μ eff) than the compiled spectra from literature for wavelengths between 300 and 600 nm.

1 January 2007 in Progress in Retinal and Eye Research
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Journal Article
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MVMirjam E.J. van Velthoven
Mirjam E.J. van Velthoven
Dirk FaberDirk Faber
Dirk Faber
FVFrank D. Verbraak
Frank D. Verbraak
TLTon van Leeuwen
Ton van Leeuwen
MSMarc D. De Smet
Marc D. De Smet

1 January 2004 in Optics Express
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Dirk FaberDirk Faber
Dirk Faber
FMFreek J. van der Meer
Freek J. van der Meer
MAMaurice Aalders
Maurice Aalders
TLTon van Leeuwen
Ton van Leeuwen
From calibrated, weakly scattering tissue phantoms (2–6 mm-1), we extract the attenuation coefficient with an accuracy of 0.8 mm-1 from OCT data in the clinically relevant ‘fixed focus’ geometry. The data are analyzed using a single scattering model and a recently developed description of the confocal point spread function (PSF). We verify the validity of the single scattering model by a quantitative comparison with a multiple scattering model, and validate the use of the PSF on the calibrated samples. Implementation of this model for existing OCT systems will be straightforward. Localized quantitative measurement of the attenuation coefficient of different tissues can significantly improve the clinical value of OCT.

8 July 2004 in Physical Review Letters
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Dirk FaberDirk Faber
Dirk Faber
MAMaurice Aalders
Maurice Aalders
EMEgbert G. Mik
Egbert G. Mik
BHBrett A. Hooper
Brett A. Hooper
MGMartin J. C. van Gemert
Martin J. C. van Gemert
TLTon van Leeuwen
Ton van Leeuwen
We report on the scattering properties of oxygenated and deoxygenated whole blood from 250 to 1000 nm. We determine the complex refractive index of oxygenated and deoxygenated hemoglobin using a Kramers-Kronig analysis and optical coherence tomography measurements. Combining these data with Mie theory, the scattering properties are calculated. The strong oxygen saturation dependent scattering effects should be taken into account in the data analysis of optical oxymetry.

27 October 2003 in IEEE Journal of Selected Topics in Quantum Electronics
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TLTon van Leeuwen
Ton van Leeuwen
Dirk FaberDirk Faber
Dirk Faber
MAMaurice Aalders
Maurice Aalders
The authors studied the axial point spread function of optical coherence tomography for Gaussian intensity profiles emitted from and coupled back into single-mode fibers for signals from a scattering medium. The determined Rayleigh length of the axial point spread function was roughly twice the one measured from the reflection of a mirror. Using the measured point spread function in combination with the single backscatter model allowed determination of the attenuation coefficient of the suspension.

1 January 2010 in Journal of Biomedical Optics
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DBDaniel M. de Bruin
Daniel M. de Bruin
RBRolf H. Bremmer
Rolf H. Bremmer
VKVitali M. Kodach
Vitali M. Kodach
RKRoy de Kinkelder
Roy de Kinkelder
JMJan van Marle
Jan van Marle
Dirk FaberDirk Faber
Dirk Faber
Current innovations in optical imaging, measurement techniques, and data analysis algorithms express the need for reliable testing and comparison methods. We present the design and characterization of silicone elastomer-based optical phantoms. Absorption is included by adding a green dye and scattering by adding TiO2 or SiO2 particles. Optical coherence tomography measurements demonstrate a linear dependence of the attenuation coefficient with scatterer concentration in the absence of absorbers. Optical transmission spectroscopy of the nonscattering absorbing phantoms shows a linear concentration dependent absorption coefficient. Both types of samples are stable over a period of 6months. Confocal microscopy of the samples demonstrates a homogeneous distribution of the scatterers, albeit with some clustering. Based on layers with thicknesses as small as 50μm, we make multifaceted structures resembling flow channels, (wavy) skin-like structures, and a layered and curved phantom resembling the human retina. Finally, we demonstrate the ability to incorporate gold nanoparticles within the phantoms. In conclusion, our phantoms are easy to make, are based on affordable materials, exhibit well-defined and controllable thickness, refractive index, absorption, and scattering coefficients, are homogeneous, and allow the incorporation of novel types of nanoparticle contrast agents. We believe our phantoms fulfill many of the requirements for an “ideal” tissue phantom, and will be particularly suited for novel optical coherence tomography applications.