Mandë Holford

Dr. Mandë Holford

Department of Chemistry and Biochemistry, Hunter College Belfer Research Building and CUNY Graduate Center, BRB 424, New York, NY 10021, USA
orcid

Research Focus & Metrics

Academic Career Length

29Years (1998-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
11 April 2012 in Molecular Ecology
Verified
Journal Article
Closed access
PDF file
NPNicolas PUILLANDRE
Nicolas PUILLANDRE
MMM. V. Modica
M. V. Modica
YZY. Zhang
Y. Zhang
LSL. Sirovich
L. Sirovich
MBM.‐C. Boisselier
M.‐C. Boisselier
SSS. Samadi
S. Samadi

3 August 2015 in Scientific Reports
Verified
Journal Article
Open access
PDF file
PAPrachi Anand
Prachi Anand
Alison L. O’NeilAlison L. O’Neil
Alison L. O’Neil
ELEmily Lin
Emily Lin
TDTrevor Douglas
Trevor Douglas
MHMandë Holford
Mandë Holford
The blood brain barrier (BBB) is often an insurmountable obstacle for a large number of candidate drugs, including peptides, antibiotics and chemotherapeutic agents. Devising an adroit delivery method to cross the BBB is essential to unlocking widespread application of peptide therapeutics. Presented here is an engineered nanocontainer for delivering peptidic drugs across the BBB encapsulating the analgesic marine snail peptide ziconotide (Prialt®). We developed a bi-functional viral nanocontainer based on theSalmonella typhimuriumbacteriophage P22 capsid, genetically incorporating ziconotide in the interior cavity and chemically attaching cell penetrating HIV-Tat peptide on the exterior of the capsid. Virus like particles (VLPs) of P22 containing ziconotide were successfully transported in several BBB models of rat and human brain microvascular endothelial cells (BMVEC) using a recyclable noncytotoxic endocytic pathway. This work demonstrates proof in principle for developing a possible alternative to intrathecal injection of ziconotide using a tunable VLP drug delivery nanocontainer to cross the BBB.

11 October 2021 in Frontiers in Bioengineering and Biotechnology
Verified
Journal Article
Open access
MMMaxwell McDermott
Maxwell McDermott
ACAntonio R. Cerullo
Antonio R. Cerullo
JPJames Parziale
James Parziale
EAEleonora Achrak
Eleonora Achrak
SSSharmin Sultana
Sharmin Sultana
MHMandë Holford
Mandë Holford
Mucins are a highly glycosylated protein family that are secreted by animals for adhesion, hydration, lubrication, and other functions. Despite their ubiquity, animal mucins are largely uncharacterized. Snails produce mucin proteins in their mucous for a wide array of biological functions, including microbial protection, adhesion and lubrication. Recently, snail mucins have also become a lucrative source of innovation with wide ranging applications across chemistry, biology, biotechnology, and biomedicine. Specifically, snail mucuses have been applied as skin care products, wound healing agents, surgical glues, and to combat gastric ulcers. Recent advances in integrated omics (genomic, transcriptomic, proteomic, glycomic) technologies have improved the characterization of gastropod mucins, increasing the generation of novel biomaterials. This perspective describes the current research on secreted snail mucus, highlighting the potential of this biopolymer, and also outlines a research strategy to fulfill the unmet need of examining the hierarchical structures that lead to the enormous biological and chemical diversity of snail mucus genes.

5 September 2017 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Closed access
PDF file
ALAbba E. Leffler
Abba E. Leffler
AKAlexander Kuryatov
Alexander Kuryatov
HZHenry A. Zebroski
Henry A. Zebroski
SPSusan R. Powell
Susan R. Powell
PFPetr Filipenko
Petr Filipenko
MHMandë Holford
Mandë Holford
Significance: Predicting how conotoxins bind to nicotinic acetylcholine receptors (nAChRs) is hard. Not only are these venom-derived peptides large, but the structures of many nAChRs are unknown. In response, we developed an ensemble-docking algorithm named ToxDock. We used ToxDock to reliably dock the conotoxin α-GID to a homology model of the α4β2 nAChR, a main nAChR in the brain and target for nicotine addiction therapeutics. A virtual screen with ToxDock identified four α-GID analogs and, based on experimental evidence, correctly predicted their activity at the α4β2 nAChR in all cases. More screening showed that two of these analogs have substantially reduced antagonism at the human α7 nAChR, a key step in optimizing α-GID into a tool for studying brain nAChRs.

26 May 2015 in PeerJ
Verified
Journal Article
Open access
PDF file
BIBranislav Igic
Branislav Igic
VNValerie Nunez
Valerie Nunez
HVHenning U. Voss
Henning U. Voss
RCRebecca Croston
Rebecca Croston
ZAZachary Aidala
Zachary Aidala
MHMark E. Hauber
Mark E. Hauber
The coevolutionary relationships between brood parasites and their hosts are often studied by examining the egg rejection behaviour of host species using artificial eggs. However, the traditional methods for producing artificial eggs out of plasticine, plastic, wood, or plaster-of-Paris are laborious, imprecise, and prone to human error. As an alternative, 3D printing may reduce human error, enable more precise manipulation of egg size and shape, and provide a more accurate and replicable protocol for generating artificial stimuli than traditional methods. However, the usefulness of 3D printing technology for egg rejection research remains to be tested. Here, we applied 3D printing technology to the extensively studied egg rejection behaviour of American robins, Turdus migratorius. Eggs of the robin’s brood parasites, brown-headed cowbirds, Molothrus ater, vary greatly in size and shape, but it is unknown whether host egg rejection decisions differ across this gradient of natural variation. We printed artificial eggs that encompass the natural range of shapes and sizes of cowbird eggs, painted them to resemble either robin or cowbird egg colour, and used them to artificially parasitize nests of breeding wild robins. In line with previous studies, we show that robins accept mimetically coloured and reject non-mimetically coloured artificial eggs. Although we found no evidence that subtle differences in parasitic egg size or shape affect robins’ rejection decisions, 3D printing will provide an opportunity for more extensive experimentation on the potential biological or evolutionary significance of size and shape variation of foreign eggs in rejection decisions. We provide a detailed protocol for generating 3D printed eggs using either personal 3D printers or commercial printing services, and highlight additional potential future applications for this technology in the study of egg rejection.

23 December 2017 in Genome Biology and Evolution
Verified
Journal Article
Open access
PDF file
AVAida Verdes
Aida Verdes
DSDanny Simpson
Danny Simpson
MHMandë Holford
Mandë Holford
Amphinomids, more commonly known as fireworms, are a basal lineage of marine annelids characterized by the presence of defensive dorsal calcareous chaetae, which break off upon contact. It has long been hypothesized that amphinomids are venomous and use the chaetae to inject a toxic substance. However, studies investigating fireworm venom from a morphological or molecular perspective are scarce and no venom gland has been identified to date, nor any toxin characterized at the molecular level. To investigate this question, we analyzed the transcriptomes of three species of fireworms—Eurythoe complanata, Hermodice carunculata, and Paramphinome jeffreysii—following a venomics approach to identify putative venom compounds. Our venomics pipeline involved de novo transcriptome assembly, open reading frame, and signal sequence prediction, followed by three different homology search strategies: BLAST, HMMER sequence, and HMMER domain. Following this pipeline, we identified 34 clusters of orthologous genes, representing 13 known toxin classes that have been repeatedly recruited into animal venoms. Specifically, the three species share a similar toxin profile with C-type lectins, peptidases, metalloproteinases, spider toxins, and CAP proteins found among the most highly expressed toxin homologs. Despite their great diversity, the putative toxins identified are predominantly involved in three major biological processes: hemostasis, inflammatory response, and allergic reactions, all of which are commonly disrupted after fireworm stings. Although the putative fireworm toxins identified here need to be further validated, our results strongly suggest that fireworms are venomous animals that use a complex mixture of toxins for defense against predators.