Ryosuke Fudou

Dr. Ryosuke Fudou

orcid

Research Focus & Metrics

Academic Career Length

26Years (2001-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
1 January 2002 in The Journal of General and Applied Microbiology
Verified
Journal Article
Closed access
RFRyosuke Fudou
Ryosuke Fudou
YJYasuko Jojima
Yasuko Jojima
TITakashi Iizuka
Takashi Iizuka
SYShigeru Yamanaka
Shigeru Yamanaka
Phenotypic and phylogenetic studies were performed on two myxobacterial strains, SMP-2 and SMP-10, isolated from coastal regions. The two strains are morphologically similar, in that both produce yellow fruiting bodies, comprising several sessile sporangioles in dense packs. They are differentiated from known terrestrial myxobacteria on the basis of salt requirements (2-3% NaCl) and the presence of anteiso-branched fatty acids. Comparative 16S rRNA gene sequencing studies revealed that SMP-2 and SMP-10 are genetically related, and constitute a new cluster within the myxobacteria group, together with the Polyangium vitellinum Pl vt1 strain as the closest neighbor. The sequence similarity between the two strains is 95.6%. Based on phenotypic and phylogenetic evidence, it is proposed that these two strains be assigned to a new genus, Haliangium gen. nov., with SMP-2 designated as Haliangium ochraceum sp. nov. (= JCM 11303(T) = DSM 14365(T)), and SMP-10 as Haliangium tepidum sp. nov. (= JCM 11304(T)= DSM 14436(T)).

1 November 2004 in International Journal of Systematic and Evolutionary Microbiology
Verified
Journal Article
Closed access
YJYasuko Jojima
Yasuko Jojima
YMYasuhiro Mihara
Yasuhiro Mihara
SSSonoko Suzuki
Sonoko Suzuki
KYKenzo Yokozeki
Kenzo Yokozeki
SYShigeru Yamanaka
Shigeru Yamanaka
RFRyosuke Fudou
Ryosuke Fudou
Three Gram-negative, aerobic, rod-shaped bacterial strains were isolated, from the pollen of Japanese flowers, as producers of xylitol; these strains were subjected to a polyphasic taxonomic study. Phylogenetic analyses of the 16S rRNA gene sequences demonstrated that these three isolates formed a new cluster within a group of acetic acid bacteria in theα-Proteobacteria. The characteristics of the three isolates were as follows: (i) their predominant quinone was Q-10; (ii) their cellular fatty acid profile contained major amounts of 2-hydroxy acids and an unsaturated straight-chain acid (C18 : 1ω7c); and (iii) their DNA G+C contents were in the range 51·9–52·3 mol%, which is around the lower limit of the reported range for the genera of acetic acid bacteria. The negligible or very weak productivity of acetic acid from ethanol and the osmophilic growth properties distinguished these strains from other acetic acid bacteria. The unique phylogenetic and phenotypic characteristics suggest that the three isolates should be classified within a novel genus and species with the proposed nameSaccharibacter floricolagen. nov., sp. nov. The type strain is strain S-877T(=AJ 13480T=JCM 12116T=DSM 15669T).

1 July 2006 in The Journal of Antibiotics
Verified
Journal Article
Open access
PDF file
TITakashi Iizuka
Takashi Iizuka
RFRyosuke Fudou
Ryosuke Fudou
YJYasuko Jojima
Yasuko Jojima
SOSumie Ogawa
Sumie Ogawa
SYShigeru Yamanaka
Shigeru Yamanaka
MOMakoto Ojika
Makoto Ojika
A slightly halophilic myxobacterial strain, SMH-27-4, was isolated from nearshore soil and shown to belong to a new myxobacterium genus based on phylogenetic analysis. This slowly-growing myxobacterium produced the novel antibiotic depsipeptides miuraenamides A and B. Their physico-chemical properties and molecular formulas, C34H42N3O7Br and C34H42N3O7I, were determined. Miuraenamides A exhibited potent and selective inhibition against a phytopathogenic microorganism, Phytophthora sp., and moderate inhibition against some fungi and yeasts, but was ineffective against bacteria. Both of the metabolites inhibited NADH oxidase at IC50 values of 50 μM, suggesting, like β-methoxyacrylate-type antibiotics, the electron transfer system of the mitochondrial respiratory chain as the cellular target.

1 January 2001 in The Journal of Antibiotics
Verified
Journal Article
Open access
PDF file
RFRyosuke Fudou
Ryosuke Fudou
TITakashi Iizuka
Takashi Iizuka
SYShigeru Yamanaka
Shigeru Yamanaka
Haliangicin, a novel β-methoxyacrylate antibiotic with a conjugated tetraene moiety, was isolated from the culture broth of a marine myxobacterium. A bacterium tentatively named as Haliangium luteum required 2-3% NaCl for the growth and production of haliangicin. Haliangicin inhibits the growth of a wide spectrum of fungi but was inactive against bacteria. In mitochondrial respiratory chains, haliangicin interfered the electron flow within the cytochrome b-c1 segment.

1 January 2001 in The Journal of Antibiotics
Verified
Journal Article
Closed access
PDF file
RFRyosuke Fudou
Ryosuke Fudou
TITakashi Iizuka
Takashi Iizuka
SSSeiichi Sato
Seiichi Sato
TAToshihiko Ando
Toshihiko Ando
NSNobuhisa Shimba
Nobuhisa Shimba
SYShigeru Yamanaka
Shigeru Yamanaka
A novel antifimgal antibiotic, haliangicin, was isolated from a culture broth of marine myxobacterium, Haliangium luteum. The planar structure of haliangicin was elucidated by spectroscopic analyses and was shown to be a new polyunsaturated compound containing β-methoxyacrylate moiety.

6 January 2016 in Molecules
Verified
Journal Article
Open access
PDF file
YSYuwei Sun
Yuwei Sun
TTTomohiko Tomura
Tomohiko Tomura
JSJunichi Sato
Junichi Sato
TITakashi Iizuka
Takashi Iizuka
RFRyosuke Fudou
Ryosuke Fudou
MOMakoto Ojika
Makoto Ojika
Myxobacteria of marine origin are rare and hard-to-culture microorganisms, but they genetically harbor high potential to produce novel antibiotics. An extensive investigation on the secondary metabolome of the unique marine myxobacterium Haliangium ochraceum SMP-2 led to the isolation of a new polyketide-nonribosomal peptide hybrid product, haliamide (1). Its structure was elucidated by spectroscopic analyses including NMR and HR-MS. Haliamide (1) showed cytotoxicity against HeLa-S3 cells with IC50 of 12 μM. Feeding experiments were performed to identify the biosynthetic building blocks of 1, revealing one benzoate, one alanine, two propionates, one acetate and one acetate-derived terminal methylene. The biosynthetic gene cluster of haliamide (hla, 21.7 kbp) was characterized through the genome mining of the producer, allowing us to establish a model for the haliamide biosynthesis. The sulfotransferase (ST)-thioesterase (TE) domains encoded in hlaB appears to be responsible for the terminal alkene formation via decarboxylation.