Katja Karppinen

Prof. Dr. Katja Karppinen

UiT - The Arctic University of Norway
orcid

Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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9 October 2014 in Frontiers in Plant Science
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Journal Article
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LZLaura Zoratti
Laura Zoratti
Katja KarppinenKatja Karppinen
Katja Karppinen
ALAna Luengo
Ana Luengo
HHHely Hã¤Ggman
Hely Hã¤Ggman
LJLaura Jaakola
Laura Jaakola
Light is one of the most important environmental factors affecting flavonoid biosynthesis in plants. The absolute dependency of light to the plant development has driven evolvement of sophisticated mechanisms to sense and transduce multiple aspects of the light signal. Light effects can be categorized in photoperiod (duration), intensity (quantity), direction and quality (wavelength) including UV-light. Recently, new information has been achieved on the regulation of light-controlled flavonoid biosynthesis in fruits, in which flavonoids have a major contribution on quality. This review focuses on the effects of the different light conditions on the control of flavonoid biosynthesis in fruit producing plants. An overview of the currently known mechanisms of the light-controlled flavonoid accumulation is provided. R2R3 MYB transcription factors are known to regulate by differential expression the biosynthesis of distinct flavonoids in response to specific light wavelengths. Despite recent advances, many gaps remain to be understood in the mechanisms of the transduction pathway of light-controlled flavonoid biosynthesis. A better knowledge on these regulatory mechanisms is likely to be useful for breeding programs aiming to modify fruit flavonoid pattern.

11 April 2019 in Frontiers in Plant Science
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Journal Article
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PTPriyanka Trivedi
Priyanka Trivedi
NNNga Nguyen
Nga Nguyen
AHAnne Linn Hykkerud
Anne Linn Hykkerud
HHHely Häggman
Hely Häggman
IMInger Martinussen
Inger Martinussen
Katja KarppinenKatja Karppinen
Katja Karppinen
The aerial parts of land plants are covered by a hydrophobic layer called cuticle that limits non-stomatal water loss and provides protection against external biotic and abiotic stresses. The cuticle is composed of polymer cutin and wax comprising a mixture of very-long-chain fatty acids and their derivatives, while also bioactive secondary metabolites such as triterpenoids are present. Fleshy fruits are also covered by the cuticle, which has an important protective role during the fruit development and ripening. Research related to the biosynthesis and composition of cuticles on vegetative plant parts has largely promoted the research on cuticular waxes in fruits. The chemical composition of the cuticular wax varies greatly between fruit species and is modified by developmental and environmental cues affecting the protective properties of the wax. This review focuses on the current knowledge of the cuticular wax biosynthesis during fleshy fruits development, and on the effect of environmental factors in regulation of the biosynthesis. Bioactive properties of fruit cuticular waxes are also briefly discussed, as well as the potential for recycling of industrial fruit residues as a valuable raw material for natural wax to be used in food, cosmetics and medicine.

5 August 2021 in New Phytologist
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Journal Article
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Katja KarppinenKatja Karppinen
Katja Karppinen
DLDeclan J. Lafferty
Declan J. Lafferty
NANick W. Albert
Nick W. Albert
NMNelli Mikkola
Nelli Mikkola
TMTony McGhie
Tony McGhie
LJLaura Jaakola
Laura Jaakola
Summary: The regulatory network of R2R3 MYB transcription factors in anthocyanin biosynthesis is not fully understood in blue‐coloured berries containing delphinidin compounds. We used blue berries of bilberry (Vaccinium myrtillus) to comprehensively characterise flavonoid‐regulating R2R3 MYBs, which revealed a new type of co‐regulation in anthocyanin biosynthesis between members of MYBA‐, MYBPA1‐ and MYBPA2‐subgroups. VmMYBA1, VmMYBPA1.1 and VmMYBPA2.2 expression was elevated at berry ripening and by abscisic acid treatment. Additionally, VmMYBA1 and VmMYBPA1.1 expression was strongly downregulated in a white berry mutant. Complementation and transient overexpression assays confirmed VmMYBA1 and VmMYBA2 to induce anthocyanin accumulation. Promoter activation assays showed that VmMYBA1, VmMYBPA1.1 and VmMYBPA2.2 had similar activity towards dihydroflavonol 4‐reductase (DFR) and anthocyanidin synthase (ANS), but differential regulation activity for UDP‐glucose flavonoid 3‐O‐glucosyltransferase (UFGT) and flavonoid 3′5′‐hydroxylase (F3′5′H) promoters. Silencing of VmMYBPA1.1 in berries led to the downregulation of key anthocyanin and delphinidin biosynthesis genes. Functional analyses of other MYBPA regulators, and a member of novel MYBPA3 subgroup, associated them with proanthocyanidin biosynthesis and F3′5′H expression. The existence of 18 flavonoid‐regulating MYBs indicated gene duplication, which may have enabled functional diversification among MYBA, MYBPA1 and MYBPA2 subgroups. Our results provide new insights into the intricate regulation of the complex anthocyanin profile found in blue‐coloured berries involving regulation of both cyanidin and delphinidin branches.

18 May 2016 in Frontiers in Plant Science
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Katja KarppinenKatja Karppinen
Katja Karppinen
LZLaura Zoratti
Laura Zoratti
NNNga Nguyenquynh
Nga Nguyenquynh
HHHely Häggman
Hely Häggman
LJLaura Jaakola
Laura Jaakola
Secondary metabolites have important defense and signaling roles, and they contribute to the overall quality of developing and ripening fruits. Blueberries, bilberries, cranberries and other Vaccinium berries are fleshy berry fruits recognized for the high levels of bioactive compounds, especially anthocyanin pigments. Besides anthocyanins and other products of the phenylpropanoid and flavonoid pathways, these berries also contain other metabolites of interest, such as carotenoid derivatives, vitamins and flavor compounds. Recently, new information has been achieved on the mechanisms related with developmental, environmental and genetic factors involved in the regulation of secondary metabolism in Vaccinium fruits. Especially light conditions and temperature are demonstrated to have a prominent role on the composition of phenolic compounds. The present review focuses on the studies on mechanisms associated with the regulation of key secondary metabolites, mainly phenolic compounds, in Vaccinium berries. The advances in the research concerning biosynthesis of phenolic compounds in Vaccinium species, including specific studies with mutant genotypes in addition to controlled and field experiments on the genotype x environment (GxE) interaction, are discussed. The recently published Vaccinium transcriptome and genome databases provide new tools for the studies on the metabolic routes.

1 August 2021 in Plant, Cell & Environment
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ASAmos Samkumar
Amos Samkumar
DJDan Jones
Dan Jones
Katja KarppinenKatja Karppinen
Katja Karppinen
ADAndrew P. Dare
Andrew P. Dare
Nina SipariNina Sipari
Nina Sipari
LJLaura Jaakola
Laura Jaakola
The biosynthesis of anthocyanins has been shown to be influenced by light quality. However, the molecular mechanisms underlying the light‐mediated regulation of fruit anthocyanin biosynthesis are not well understood. In this study, we analysed the effects of supplemental red and blue light on the anthocyanin biosynthesis in non‐climacteric bilberry (Vaccinium myrtillus L.). After 6 days of continuous irradiation during ripening, both red and blue light elevated concentration of anthocyanins, up to 12‐ and 4‐folds, respectively, compared to the control. Transcriptomic analysis of ripening berries showed that both light treatments up‐regulated all the major anthocyanin structural genes, the key regulatory MYB transcription factors and abscisic acid (ABA) biosynthetic genes. However, higher induction of specific genes of anthocyanin and delphinidin biosynthesis alongside ABA signal perception and metabolism were found in red light. The difference in red and blue light signalling was found in 9‐cis‐epoxycarotenoid dioxygenase (NCED), ABA receptor pyrabactin resistance‐like (PYL) and catabolic ABA‐8'hydroxylase gene expression. Red light also up‐regulated expression of soluble N‐ethylmaleimide‐sensitive factor attachment protein receptor (SNARE) domain transporters, which may indicate involvement of these proteins in vesicular trafficking of anthocyanins during fruit ripening. Our results suggest differential signal transduction and transport mechanisms between red and blue light in ABA‐regulated anthocyanin and delphinidin biosynthesis during bilberry fruit ripening.

29 August 2018 in Frontiers in Plant Science
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Journal Article
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Katja KarppinenKatja Karppinen
Katja Karppinen
PTPinja Tegelberg
Pinja Tegelberg
HHHely Häggman
Hely Häggman
LJLaura Jaakola
Laura Jaakola
Ripening of non-climacteric bilberry (Vaccinium myrtillus L.) fruit is characterized by a high accumulation of health-beneficial anthocyanins. Plant hormone abscisic acid (ABA) and sucrose have been shown to be among the central signaling molecules coordinating non-climacteric fruit ripening and anthocyanin accumulation in some fruits such as strawberry. Our earlier studies have demonstrated an elevation in endogenous ABA level in bilberry fruit at the onset of ripening indicating a role for ABA in the regulation of bilberry fruit ripening. In the present study, we show that the treatment of unripe green bilberry fruits with exogenous ABA significantly promotes anthocyanin biosynthesis and accumulation both in fruits attached and detached to the plant. In addition, ABA biosynthesis inhibitor, fluridone, delayed anthocyanin accumulation in bilberries. Exogenous ABA also induced the expression of several genes involved in cell wall modification in ripening bilberry fruits. Furthermore, silencing of VmNCED1, the key gene in ABA biosynthesis, was accompanied by the down-regulation in the expression of key anthocyanin biosynthetic genes. In contrast, the treatment of unripe green bilberry fruits with exogenous sucrose or glucose did not lead to an enhancement in the anthocyanin accumulation neither in fruits attached to plant nor in post-harvest fruits. Moreover, sugars failed to induce the expression of genes associated in anthocyanin biosynthesis or ABA biosynthesis while could elevate expression of some genes associated with cell wall modification in post-harvest bilberry fruits. Our results demonstrate that ABA plays a major role in the regulation of ripening-related processes such as anthocyanin biosynthesis and cell wall modification in bilberry fruit, whereas sugars seem to have minor regulatory roles in the processes. The results indicate that the regulation of bilberry fruit ripening differs from strawberry that is currently considered as a model of non-climacteric fruit ripening. In this study, we also identified transcription factors, which expression was enhanced by ABA, as potential regulators of ABA-mediated bilberry fruit ripening processes.