Seagrass meadows are declining globally. In Indonesia, 75% loss has been reported in the last 5 years. The decrease of the seagrass area is influenced by the simultaneous occurrence of many factors at the local and global scale, including nutrient enrichment and climate change. This study aims to find out how increasing temperature and nutrient enrichment affect the morphological, biochemical and physiological responses of Enhalus acoroides in the seedling phase, which has not previously been studied. To achieve these aims, a laboratory experiment of combined temperature and nutrient treatments was conducted using recently-germinated seedlings of E. acoroides. The results showed that the seedlings were tolerant to an extended exposure to the current ambient maximum temperature. Under higher temperature treatment, the seedlings were observed to increase in aboveground size traits (e.g., number of leaves, leaf length, biomass, and leaf area), as well as in belowground traits, such as root length. The results in this study also showed that the initial seed size matters for morphological responses. On the contrary, nutrient responses of seedlings were practically absent, suggesting they could rely on internal reserves. Interaction between both factors was limited, with the exception of low temperature and high nutrient treatment, in which the AG:BG ratio and leaf elongation rate increased. Fluorescence parameters were not influenced by any of the water treatments. The results in this study suggest that E. acoroides seedlings rely energetically in the reserves within the seedling and that increasing temperature might result in faster seedling development, although no interactions with other organisms were tested. This is of importance when studying the resilience capacity of this species and when restoration attempts are planned, as a faster root development would provide a faster stabilization in the sediment and the survival of the whole plant.

Farming of Eucheuma denticulatum is a major activity in Zanzibar affecting seagrass ecosystems primarily through shading and trampling. The aim of this study was to test the impacts of shading and trampling during seaweed farming on seagrass meadows composed by Halophila stipulacea and Thalassia hemprichii and their associated benthic macroalgae. Areas covered by these species were selected for the building of seaweed farms in three treatments: seaweed farm plots (with shading and trampling effects), trampling plots (with trampling effects only), and control plots (with no shading or trampling effects). Reduction of light within the plots was recorded over 9 weeks. Percentage cover of seagrasses and macroalgae and shoot density of seagrasses were measured over 12 weeks to assess the impact of shading and trampling by seaweed farming activities. Light was significantly reduced in the seaweed farm plots by 75 to 90% by the end of a seaweed growth cycle. H. stipulacea, despite its capacity for rapid growth, was significantly affected by the combination of shading and trampling under the seaweed farm treatment, while the climax seagrass species T. hemprichii was unaffected. Due to the decline in H. stipulacea, benthic macroalgae cover increased in the seaweed farm treatment, suggesting a change in seagrass community dynamics. In contrast, trampling had a negative effect on the benthic macroalgae as an isolated disturbance, which suggests that seagrasses are more resistant to trampling than macroalgae and would likely dominate the benthic macrophyte community under these conditions.

The lack of top‐down control on Tripneustes gratilla, a sea urchin commonly known to graze on seagrass, and the bottom‐up control of its feeding preference, led to the overgrazing of seagrass meadows of the species Thalassodendron ciliatum in Changuu Island (Zanzibar Archipelago). The impact of overgrazing on seagrasses was assessed by mapping the presence of grazed versus non‐grazed seagrass patches in the study site, while the top‐down control on T. gratilla was assessed by measuring the abundance of its fish predators. The feeding preference and distribution of T. gratilla were characterized by calculating the electivity indexes for each seagrass species and measuring sea urchin density, respectively. Approximately half of the patches of T. ciliatum were overgrazed, while predatory fishes of T. gratilla were absent from the site. The Vanderploeg and Scavia's Relativized Electivity Index indicated that T. gratilla had a feeding preference for T. ciliatum, which was also supported by higher urchin densities within T. ciliatum dominated patches. Bottom‐up control of grazing activity was observed by quantifying and analyzing morphological, nutritional, and the chemical defense traits of the seagrass in relation to feeding preference and urchin density. Feeding was positively correlated to the seagrass tissue C:P ratio (ρ = 0.9), whereas urchin density showed no correlations. The bottom‐up control of the feeding preference and agglomeration of T. gratilla in T. ciliatum meadows, together with the lack of evidence of substantial top‐down control and the long recovery time of T. ciliatum led to the overgrazing of this species at this site. Overgrazing, therefore, was shown to be the result of multiple factors ranging from the traits of the seagrass and feeding preference of T. gratilla, to the abundance of predators in this area.

Increasing temperature and CO₂ concentration are among the most important factors affecting marine ecosystems under climate change. We investigated the morphological, biochemical, and physiological trait responses of seedlings of the tropical seagrass Enhalus acoroides under experimental conditions. Trait responses were greater under temperature effects than increasing CO₂ concentration. Seedlings under rising temperatures showed enhanced leaf growth, lower leaf nutrient content, and stimulated down-regulating mechanisms in terms of photo-physiology. Increasing CO₂ concentrations did not show any significant effects independently. There was a significant interaction for some of the trait responses considered, such as leaf number and carbon content in the roots, and trends of higher starch concentrations in the leaves and lower rETR_max under combined enriched CO₂ and high temperature, even though none of these interactions were synergistic. Understanding the single and interactive trait responses of seagrass seedlings to increasing temperature and CO₂ concentration is of importance to determine the relative responses of early life stages of seagrasses, which may differ from adult plants, in order to form a more holistic view of seagrass ecosystem health under climate change.

Algal blooms are increasing worldwide, driven by elevated nutrient inputs. However, it is still unknown how tropical benthic algae will respond to heatwaves, which are expected to be more frequent under global warming. In the present study, a multifactorial experiment was carried out to investigate the potential synergistic effects of increased ammonium inputs (25 μM, control at 2.5 μM) and a heatwave (31°C, control at 25°C) on the growth and physiology (e.g., ammonium uptake, nutrient assimilation, photosynthetic performance, and pigment concentrations) of two bloom‐forming algal species, Cladophoropsis sp. and Laurencia sp. Both algae positively responded to elevated ammonium concentrations with higher growth and chlorophyll a and lutein concentrations. Increased temperature was generally a less important driver, interacting with elevated ammonium by decreasing the algaes' %N content and N:P ratios. Interestingly, this stress response was not captured by the photosynthetic yield (Fv/Fm) nor by the carbon assimilation (%C), which increased for both algae at higher temperatures. The negative effects of higher temperature were, however, buffered by nutrient inputs, showing an antagonistic response in the combined treatment for the concentration of VAZ (violaxanthin, antheraxanthin, zeaxanthin) and thalli growth. Ammonium uptake was initially higher for Cladophoropsis sp. and increased for Laurencia sp. over experimental time, showing an acclimation capacity even in a short time interval. This experiment shows that both algae benefited from increased ammonium pulses and were able to overcome the otherwise detrimental stress of increasingly emerging temperature anomalies, which provide them a strong competitive advantage and might support their further expansions in tropical marine systems.