In recent years, significant advances have been made in the design and evaluation of balanced (hyper)graph partitioning algorithms. We survey trends of the past decade in practical algorithms for balanced (hyper)graph partitioning together with future research directions. Our work serves as an update to a previous survey on the topic [ 29 ]. In particular, the survey extends the previous survey by also covering hypergraph partitioning and has an additional focus on parallel algorithms.
Intelligent and multitiered quantitative analysis of biological systems rapidly evolves to a key technique in studying biomolecular cancer aspects. Newly emerging advances in both measurement as well as bio-inspired computational techniques have facilitated the development of lipidomics technologies and offer an excellent opportunity to understand regulation at the molecular level in many diseases.
Traditionally, the quality of orthogonal planar drawings is quantified by either the total number of bends, or the maximum number of bends per edge. However, this neglects that in typical applications, edges have varying importance. In this work, we investigate an approach that allows to specify the maximum number of bends for each edge individually, depending on its importance. We consider a new problem called FlexDraw that is defined as follows. Given a planar graph G=(V,E) on n vertices with maximum degree 4 and a function $\operatorname{flex}: E \longrightarrow\mathbb{N}_{0}$ that assigns a flexibility to each edge, does G admit a planar embedding on the grid such that each edge e has at most $\operatorname{flex}(e)$ bends? Note that in our setting the combinatorial embedding of G is not fixed. FlexDraw directly extends the problem β-embeddability asking whether G can be embedded with at most β bends per edge. We give an algorithm with running-time O(n2) solving FlexDraw when the flexibility of each edge is positive. This includes 1-embeddability as a special case and thus closes the complexity gap between 0-embeddability, which is $\mathcal{NP}$ -hard to decide, and 2-embeddability, which is efficiently solvable since every planar graph with maximum degree 4 admits a 2-embedding except for the octahedron. In addition to the polynomial-time algorithm we show that FlexDraw is $\mathcal{NP}$ -hard even if the edges with flexibility 0 induce a tree or a union of disjoint stars.
We study the problem of quickly computing point-to-point shortest paths in massive road networks with traffic predictions. Incorporating traffic predictions into routing allows, for example, to avoid commuter traffic congestions. Existing techniques follow a two-phase approach: In a preprocessing step, an index is built. The index depends on the road network and the traffic patterns but not on the path start and end. The latter are the input of the query phase, in which shortest paths are computed. All existing techniques have large index size, slow query running times or may compute suboptimal paths. In this work, we introduce CATCHUp (Customizable Approximated Time-dependent Contraction Hierarchies through Unpacking), the first algorithm that simultaneously achieves all three objectives. The core idea of CATCHUp is to store paths instead of travel times at shortcuts. Shortcut travel times are derived lazily from the stored paths. We perform an experimental study on a set of real world instances and compare our approach with state-of-the-art techniques. Our approach achieves the fastest preprocessing, competitive query running times and up to 38 times smaller indexes than competing approaches.
Graph partitioning has many applications. We consider the acceleration of shortest path queries in road networks using Customizable Contraction Hierarchies (CCH). It is based on computing a nested dissection order by recursively dividing the road network into parts. Recently, with FlowCutter and Inertial Flow, two flow-based graph bipartitioning algorithms have been proposed for road networks. While FlowCutter achieves high-quality results and thus fast query times, it is rather slow. Inertial Flow is particularly fast due to the use of geographical information while still achieving decent query times. We combine the techniques of both algorithms to achieve more than six times faster preprocessing times than FlowCutter and even faster queries on the Europe road network. We show that, using 16 cores of a shared-memory machine, this preprocessing needs four minutes.
About Me
Professor of Computer Science, Karlsruhe Institute of Technology (KIT)
Professor of Computer Science, Karlsruhe Institute of Technology (KIT)