Jeongsik Kim

Prof. Jeongsik Kim


Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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20 February 2009 in Science
Verified
Journal Article
Closed access
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JKJin Hee Kim
Jin Hee Kim
HWHye Ryun Woo
Hye Ryun Woo
JKJeongsik Kim
Jeongsik Kim
PLPyung Ok Lim
Pyung Ok Lim
ILIn Chul Lee
In Chul Lee
HNHong Gil Nam
Hong Gil Nam
Aging induces gradual yet massive cell death in higher organisms, including annual plants. Even so, the underlying regulatory mechanisms are barely known, despite the long-standing interest in this topic. Here, we demonstrate that ORE1, which is a NAC (NAM, ATAF, and CUC) transcription factor, positively regulates aging-induced cell death in Arabidopsis leaves. ORE1 expression is up-regulated concurrently with leaf aging by EIN2 but is negatively regulated by miR164. miR164 expression gradually decreases with aging through negative regulation by EIN2 , which leads to the elaborate up-regulation of ORE1 expression. However, EIN2 still contributes to aging-induced cell death in the absence of ORE1 . The trifurcate feed-forward pathway involving ORE1, miR164 , and EIN2 provides a highly robust regulation to ensure that aging induces cell death in Arabidopsis leaves.

19 August 2007 in Nature
Verified
Journal Article
Closed access
WKWoe-Yeon Kim
Woe-Yeon Kim
SFSumire Fujiwara
Sumire Fujiwara
SSSung-Suk Suh
Sung-Suk Suh
JKJeongsik Kim
Jeongsik Kim
YKYumi Kim
Yumi Kim
DSDavid E Somers
David E Somers

24 December 2012 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Open access
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LWLei Wang
Lei Wang
JKJeongsik Kim
Jeongsik Kim
DSDavid E Somers
David E Somers
Circadian clocks are ubiquitous molecular time-keeping mechanisms that coordinate physiology and metabolism and provide an adaptive advantage to higher plants. The central oscillator of the plant clock is composed of interlocked feedback loops that involve multiple repressive factors acting throughout the circadian cycle. PSEUDO RESPONSE REGULATORS (PRRs) comprise a five-member family that is essential to the function of the central oscillator. PRR5, PRR7, and PRR9 can bind the promoters of the core clock genes CIRCADIAN CLOCK ASSOCIATED 1 ( CCA1 ) and LATE ELONGATED HYPOCOTYL ( LHY ) to restrict their expression to near dawn, but the mechanism has been unclear. Here we report that members of the plant Groucho/Tup1 corepressor family, TOPLESS/TOPLESS-RELATED (TPL/TPR), interact with these three PRR proteins at the CCA1 and LHY promoters to repress transcription and alter circadian period. This activity is diminished in the presence of the inhibitor trichostatin A, indicating the requirement of histone deacetylase for full TPL activity. Additionally, a complex of PRR9, TPL, and histone deacetylase 6, can form in vivo, implicating this tripartite association as a central repressor of circadian gene expression. Our findings show that the TPL/TPR corepressor family are components of the central circadian oscillator mechanism and reinforces the role of this family as central to multiple signaling pathways in higher plants.


24 August 2017 in Journal of Experimental Botany
Verified
Journal Article
Open access
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JKJeongsik Kim
Jeongsik Kim
JKJin Hee Kim
Jin Hee Kim
JLJAE IL LYU
JAE IL LYU
HWHye Ryun Woo
Hye Ryun Woo
PLPyung Ok Lim
Pyung Ok Lim
Plants undergo developmental changes throughout their life history. Senescence, the final stage in the life history of a leaf, is an important and unique developmental process whereby plants relocate nutrients from leaves to other developing organs, such as seeds, stems, or roots. Recent attempts to answer fundamental questions about leaf senescence have employed a combination of new ideas and advanced technologies. As senescence is an integral part of a plant’s life history that is linked to earlier developmental stages, age-associated leaf senescence may be analysed from a life history perspective. The successful utilization of multi-omics approaches has resolved the complicated process of leaf senescence, replacing a component-based view with a network-based molecular mechanism that acts in a spatial-temporal manner. Senescence and death are critical for fitness and are thus evolved characters. Recent efforts have begun to focus on understanding the evolutionary basis of the developmental process that incorporates age information and environmental signals into a plant’s survival strategy. This review describes recent insights into the regulatory mechanisms of leaf senescence in terms of systems-level spatiotemporal changes, presenting them from the perspectives of life history strategy and evolution.

1 September 2010 in Journal of Experimental Botany
Verified
Journal Article
Open access
HWHye Ryun Woo
Hye Ryun Woo
JKJin Hee Kim
Jin Hee Kim
JKJunyoung Kim
Junyoung Kim
JKJeongsik Kim
Jeongsik Kim
ULUng Lee
Ung Lee
PLPyung Ok Lim
Pyung Ok Lim
Leaf senescence is a developmentally programmed cell death process that constitutes the final step of leaf development and involves the extensive reprogramming of gene expression. Despite the importance of senescence in plants, the underlying regulatory mechanisms are not well understood. This study reports the isolation and functional analysis of RAV1, which encodes a RAV family transcription factor. Expression of RAV1 and its homologues is closely associated with leaf maturation and senescence. RAV1 mRNA increased at a later stage of leaf maturation and reached a maximal level early in senescence, but decreased again during late senescence. This profile indicates that RAV1 could play an important regulatory role in the early events of leaf senescence. Furthermore, constitutive and inducible overexpression of RAV1 caused premature leaf senescence. These data strongly suggest that RAV1 is sufficient to cause leaf senescence and it functions as a positive regulator in this process.