Mark Tuckerman

Prof. Mark Tuckerman


Research Focus & Metrics

Academic Career Length

28Years (1999-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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14 December 2020 in Chemical Reviews
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Journal Article
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BHBenworth B. Hansen
Benworth B. Hansen
SSStephanie Spittle
Stephanie Spittle
BCBrian Chen
Brian Chen
DPDerrick Poe
Derrick Poe
YZYong Zhang
Yong Zhang
JSJoshua R. Sangoro
Joshua R. Sangoro

1 June 2002 in Nature
Verified
Journal Article
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PDF file
MTMark Tuckerman
Mark Tuckerman
DMDominik Marx
Dominik Marx
MPMichele Parrinello
Michele Parrinello

11 October 2017 in Nature Communications
Verified
Journal Article
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FBFelix Brockherde
Felix Brockherde
LVLeslie Vogt
Leslie Vogt
LLLi Li
Li Li
MTMark Tuckerman
Mark Tuckerman
KBKieron Burke
Kieron Burke
KMKlaus-Robert Müller
Klaus-Robert Müller
Last year, at least 30,000 scientific papers used the Kohn–Sham scheme of density functional theory to solve electronic structure problems in a wide variety of scientific fields. Machine learning holds the promise of learning the energy functional via examples, bypassing the need to solve the Kohn–Sham equations. This should yield substantial savings in computer time, allowing larger systems and/or longer time-scales to be tackled, but attempts to machine-learn this functional have been limited by the need to find its derivative. The present work overcomes this difficulty by directly learning the density-potential and energy-density maps for test systems and various molecules. We perform the first molecular dynamics simulation with a machine-learned density functional on malonaldehyde and are able to capture the intramolecular proton transfer process. Learning density models now allows the construction of accurate density functionals for realistic molecular systems.

3 May 2005 in Proceedings of the National Academy of Sciences
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Journal Article
Closed access
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RIRadu Iftimie
Radu Iftimie
PMPeter Minary
Peter Minary
MTMark Tuckerman
Mark Tuckerman
The methodology of ab initio molecular dynamics, wherein finite-temperature dynamical trajectories are generated by using forces computed “on the fly” from electronic structure calculations, has had a profound influence in modern theoretical research. Ab initio molecular dynamics allows chemical processes in condensed phases to be studied in an accurate and unbiased manner, leading to new paradigms in the elucidation of microscopic mechanisms, rationalization of experimental data, and testable predictions of new phenomena. The purpose of this work is to give a brief introduction to the technique and to review several important recent developments in the field. Several illustrative examples showing the power of the technique have been chosen. Perspectives on future directions in the field also will be given.

16 October 2020 in Nature Communications
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Journal Article
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MBMihail Bogojeski
Mihail Bogojeski
LVLeslie Vogt-Maranto
Leslie Vogt-Maranto
MTMark Tuckerman
Mark Tuckerman
KMKlaus-Robert Müller
Klaus-Robert Müller
KBKieron Burke
Kieron Burke
Kohn-Sham density functional theory (DFT) is a standard tool in most branches of chemistry, but accuracies for many molecules are limited to 2-3 kcal ⋅ mol−1 with presently-available functionals. Ab initio methods, such as coupled-cluster, routinely produce much higher accuracy, but computational costs limit their application to small molecules. In this paper, we leverage machine learning to calculate coupled-cluster energies from DFT densities, reaching quantum chemical accuracy (errors below 1 kcal ⋅ mol−1) on test data. Moreover, density-based Δ-learning (learning only the correction to a standard DFT calculation, termed Δ-DFT ) significantly reduces the amount of training data required, particularly when molecular symmetries are included. The robustness of Δ-DFT is highlighted by correcting “on the fly” DFT-based molecular dynamics (MD) simulations of resorcinol (C6H4(OH)2) to obtain MD trajectories with coupled-cluster accuracy. We conclude, therefore, that Δ-DFT facilitates running gas-phase MD simulations with quantum chemical accuracy, even for strained geometries and conformer changes where standard DFT fails.

22 May 2019 in The Journal of Physical Chemistry A
Verified
Journal Article
Closed access
ZZZhijun Zhang
Zhijun Zhang
XLXinzijian Liu
Xinzijian Liu
KYKangyu Yan
Kangyu Yan
MTMark Tuckerman
Mark Tuckerman
Jian LiuJian Liu
Jian Liu