Nick Heilenkötter

Nick Heilenkötter

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Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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25 August 2023 in Inverse Problems
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DTDerick Nganyu Tanyu
Derick Nganyu Tanyu
JNJianfeng Ning
Jianfeng Ning
TFTom Freudenberg
Tom Freudenberg
NHNick Heilenkötter
Nick Heilenkötter
ARAndreas Rademacher
Andreas Rademacher
PMPeter Maass
Peter Maass
Recent years have witnessed a growth in mathematics for deep learning—which seeks a deeper understanding of the concepts of deep learning with mathematics and explores how to make it more robust—and deep learning for mathematics, where deep learning algorithms are used to solve problems in mathematics. The latter has popularised the field of scientific machine learning where deep learning is applied to problems in scientific computing. Specifically, more and more neural network (NN) architectures have been developed to solve specific classes of partial differential equations (PDEs). Such methods exploit properties that are inherent to PDEs and thus solve the PDEs better than standard feed-forward NNs, recurrent NNs, or convolutional neural networks. This has had a great impact in the area of mathematical modelling where parametric PDEs are widely used to model most natural and physical processes arising in science and engineering. In this work, we review such methods as well as their extensions for parametric studies and for solving the related inverse problems. We also show their relevance in various industrial applications.

13 April 2021 in Journal of Imaging
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JAJean Le'Clerc Arrastia
Jean Le'Clerc Arrastia
NHNick Heilenkötter
Nick Heilenkötter
DBDaniel Otero Baguer
Daniel Otero Baguer
LHLena Hauberg-Lotte
Lena Hauberg-Lotte
TBTobias Boskamp
Tobias Boskamp
PMPeter Maass
Peter Maass
Accurate and fast assessment of resection margins is an essential part of a dermatopathologist’s clinical routine. In this work, we successfully develop a deep learning method to assist the dermatopathologists by marking critical regions that have a high probability of exhibiting pathological features in whole slide images (WSI). We focus on detecting basal cell carcinoma (BCC) through semantic segmentation using several models based on the UNet architecture. The study includes 650 WSI with 3443 tissue sections in total. Two clinical dermatopathologists annotated the data, marking tumor tissues’ exact location on 100 WSI. The rest of the data, with ground-truth sectionwise labels, are used to further validate and test the models. We analyze two different encoders for the first part of the UNet network and two additional training strategies: (a) deep supervision, (b) linear combination of decoder outputs, and obtain some interpretations about what the network’s decoder does in each case. The best model achieves over 96%, accuracy, sensitivity, and specificity on the Test set.

13 November 2023 in Inverse Problems
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CAClemens Arndt
Clemens Arndt
ADAlexander Denker
Alexander Denker
SDSören Dittmer
Sören Dittmer
NHNick Heilenkötter
Nick Heilenkötter
MIMeira Iske
Meira Iske
JNJudith Nickel
Judith Nickel
Learned inverse problem solvers exhibit remarkable performance in applications like image reconstruction tasks. These data-driven reconstruction methods often follow a two-step procedure. First, one trains the often neural network-based reconstruction scheme via a dataset. Second, one applies the scheme to new measurements to obtain reconstructions. We follow these steps but parameterize the reconstruction scheme with invertible residual networks (iResNets). We demonstrate that the invertibility enables investigating the influence of the training and architecture choices on the resulting reconstruction scheme. For example, assuming local approximation properties of the network, we show that these schemes become convergent regularizations. In addition, the investigations reveal a formal link to the linear regularization theory of linear inverse problems and provide a nonlinear spectral regularization for particular architecture classes. On the numerical side, we investigate the local approximation property of selected trained architectures and present a series of experiments on the MNIST dataset that underpin and extend our theoretical findings.

6 March 2024 in Inverse Problems
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Journal Article
Open access
CAClemens Arndt
Clemens Arndt
SDSören Dittmer
Sören Dittmer
NHNick Heilenkötter
Nick Heilenkötter
MIMeira Iske
Meira Iske
TKTobias Kluth
Tobias Kluth
JNJudith Nickel
Judith Nickel
Learning-based methods for inverse problems, adapting to the data’s inherent structure, have become ubiquitous in the last decade. Besides empirical investigations of their often remarkable performance, an increasing number of works address the issue of theoretical guarantees. Recently, Arndt et al (2023 Inverse Problems 39 125018) exploited invertible residual networks (iResNets) to learn provably convergent regularizations given reasonable assumptions. They enforced these guarantees by approximating the linear forward operator with an iResNet. Supervised training on relevant samples introduces data dependency into the approach. An open question in this context is to which extent the data’s inherent structure influences the training outcome, i.e. the learned reconstruction scheme. Here, we address this delicate interplay of training design and data dependency from a Bayesian perspective and shed light on opportunities and limitations. We resolve these limitations by analyzing reconstruction-based training of the inverses of iResNets, where we show that this optimization strategy introduces a level of data-dependency that cannot be achieved by approximation training. We further provide and discuss a series of numerical experiments underpinning and extending the theoretical findings.

30 October 2025 in arXiv
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NHNick Heilenkötter
Nick Heilenkötter
Can regularization terms in the training of invertible neural networks lead to known Bayesian point estimators in reconstruction? Invertible networks are attractive for inverse problems due to their inherent stability and interpretability. Recently, optimization strategies for invertible neural networks that approximate either a reconstruction map or the forward operator have been studied from a Bayesian perspective, but each has limitations. To address this, we introduce and analyze two regularization terms for the network training that, upon inversion of the network, recover properties of classical Bayesian point estimators: while the first can be connected to the posterior mean, the second resembles the MAP estimator. Our theoretical analysis characterizes how each loss shapes both the learned forward operator and its inverse reconstruction map. Numerical experiments support our findings and demonstrate how these loss-term regularizers introduce data-dependence in a stable and interpretable way.

15 March 2024 in arXiv
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MBMatthias Beckmann
Matthias Beckmann
NHNick Heilenkötter
Nick Heilenkötter
In recent years, deep learning techniques have shown great success in various tasks related to inverse problems, where a target quantity of interest can only be observed through indirect measurements by a forward operator. Common approaches apply deep neural networks in a post-processing step to the reconstructions obtained by classical reconstruction methods. However, the latter methods can be computationally expensive and introduce artifacts that are not present in the measured data and, in turn, can deteriorate the performance on the given task. To overcome these limitations, we propose a class of equivariant neural networks that can be directly applied to the measurements to solve the desired task. To this end, we build appropriate network structures by developing layers that are equivariant with respect to data transformations induced by well-known symmetries in the domain of the forward operator. We rigorously analyze the relation between the measurement operator and the resulting group representations and prove a representer theorem that characterizes the class of linear operators that translate between a given pair of group actions. Based on this theory, we extend the existing concepts of Lie group equivariant deep learning to inverse problems and introduce new representations that result from the involved measurement operations. This allows us to efficiently solve classification, regression or even reconstruction tasks based on indirect measurements also for very sparse data problems, where a classical reconstruction-based approach may be hard or even impossible. We illustrate the effectiveness of our approach in numerical experiments and compare with existing methods.