Background: Lignocellulose is the most abundant biomass on earth. However, biomass recalcitrance has become a major factor affecting biofuel production. Although cellulose crystallinity significantly influences biomass saccharification, little is known about the impact of three major wall polymers on cellulose crystallization. In this study, we selected six typical pairs of Miscanthus samples that presented different cell wall compositions, and then compared their cellulose crystallinity and biomass digestibility after various chemical pretreatments. Results: A Miscanthus sample with a high hemicelluloses level was determined to have a relatively low cellulose crystallinity index (CrI) and enhanced biomass digestibility at similar rates after pretreatments of NaOH and H₂SO₄ with three concentrations. By contrast, a Miscanthus sample with a high cellulose or lignin level showed increased CrI and low biomass saccharification, particularly after H₂SO₄ pretreatment. Correlation analysis revealed that the cellulose CrI negatively affected biomass digestion. Increased hemicelluloses level by 25% or decreased cellulose and lignin contents by 31% and 37% were also found to result in increased hexose yields by 1.3-times to 2.2-times released from enzymatic hydrolysis after NaOH or H₂SO₄ pretreatments. The findings indicated that hemicelluloses were the dominant and positive factor, whereas cellulose and lignin had synergistic and negative effects on biomass digestibility. Conclusions: Using six pairs of Miscanthus samples with different cell wall compositions, hemicelluloses were revealed to be the dominant factor that positively determined biomass digestibility after pretreatments with NaOH or H₂SO₄ by negatively affecting cellulose crystallinity. The results suggested potential approaches to the genetic modifications of bioenergy crops.

Miscanthus is a leading bioenergy crop with enormous lignocellulose production potential for biofuels and chemicals. However, lignocellulose recalcitrance leads to biomass process difficulty for an efficient bioethanol production. Hence, it becomes essential to identify the integrative impact of lignocellulose recalcitrant factors on cellulose accessibility for biomass enzymatic hydrolysis. In this study, we analyzed four typical pairs of Miscanthus accessions that showed distinct cell wall compositions and sorted out three major factors that affected biomass saccharification for maximum bioethanol production. Among the three optimal (i.e., liquid hot water, H2SO4 and NaOH) pretreatments performed, mild alkali pretreatment (4% NaOH at 50 °C) led to almost complete biomass saccharification when 1% Tween-80 was co-supplied into enzymatic hydrolysis in the desirable Miscanthus accessions. Consequently, the highest bioethanol yields were obtained at 19% (% dry matter) from yeast fermentation, with much higher sugar–ethanol conversion rates by 94–98%, compared to the other Miscanthus species subjected to stronger pretreatments as reported in previous studies. By comparison, three optimized pretreatments distinctively extracted wall polymers and specifically altered polymer features and inter-linkage styles, but the alkali pretreatment caused much increased biomass porosity than that of the other pretreatments. Based on integrative analyses, excellent equations were generated to precisely estimate hexoses and ethanol yields under various pretreatments and a hypothetical model was proposed to outline an integrative impact on biomass saccharification and bioethanol production subjective to a predominate factor (CR stain) of biomass porosity and four additional minor factors (DY stain, cellulose DP, hemicellulose X/A, lignin G-monomer). Using four pairs of Miscanthus samples with distinct cell wall composition and varied biomass saccharification, this study has determined three main factors of lignocellulose recalcitrance that could be significantly reduced for much-increased biomass porosity upon optimal pretreatments. It has also established a novel standard that should be applicable to judge any types of biomass process technology for high biofuel production in distinct lignocellulose substrates. Hence, this study provides a potential strategy for precise genetic modification of lignocellulose in all bioenergy crops.

Genetic modification of plant cell walls has been implemented to reduce lignocellulosic recalcitrance for biofuel production. Plant glycoside hydrolase family 9 (GH9) comprises endo-β-1,4-glucanase in plants. Few studies have examined the roles of GH9 in cell wall modification. In this study, we independently overexpressed two genes from GH9B subclasses (OsGH9B1 and OsGH9B3) and examined cell wall features and biomass saccharification in transgenic rice plants. Compared with the wild type (WT, Nipponbare), the OsGH9B1 and OsGH9B3 transgenic rice plants, respectively, contained much higher OsGH9B1 and OsGH9B3 protein levels and both proteins were observed in situ with nonspecific distribution in the plant cells. The transgenic lines exhibited significantly increased cellulase activity in vitro than the WT. The OsGH9B1 and OsGH9B3 transgenic plants showed a slight alteration in three wall polymer compositions (cellulose, hemicelluloses, and lignin), in their stem mechanical strength and biomass yield, but were significantly decreased in the cellulose degree of polymerization (DP) and lignocellulose crystalline index (CrI) by 21–22%. Notably, the crude cellulose substrates of the transgenic lines were more efficiently digested by cellobiohydrolase (CBHI) than those of the WT, indicating the significantly increased amounts of reducing ends of β-1,4-glucans in cellulose microfibrils. Finally, the engineered lines generated high sugar yields after mild alkali pretreatments and subsequent enzymatic hydrolysis, resulting in the high bioethanol yields obtained at 22.5% of dry matter. Overproduction of OsGH9B1/B3 enzymes should have specific activity in the postmodification of cellulose microfibrils. The increased reducing ends of β-1,4-glucan chains for reduced cellulose DP and CrI positively affected biomass enzymatic saccharification. Our results demonstrate a potential strategy for genetic modification of cellulose microfibrils in bioenergy crops.

Rice is a major food crop containing large amounts of lignocellulose residues usable for biofuels. In this study, we collected transgenic rice plants that over-produced Trichoderma reesei β-1,4-D-glucosidase (BGL I) into the cell walls in the mature straws. Without any pretreatment, the transgenic rice straws showed a consistently higher biomass enzymatic saccharification than the wild-type (WT) cultivar, in particular when 1% Tween-80 or 0.5% PEG-4000 was co-supplied into the enzymatic hydrolysis. Notably, under mild alkali pretreatment (1% NaOH at 50 °C for 2 h), the desirable transgenic line exhibited complete biomass enzymatic hydrolysis, resulting in the highest bioethanol yield of 21% (% dry matter) when compared with the rice and other bioenergy crops subjected to stronger pretreatment conditions reported in previous studies. Meanwhile, despite relatively low hexose yields obtained under 1% H₂SO₄ pretreatment, the transgenic rice straw also showed high bioethanol production at 18% due to an almost complete sugar–ethanol conversion rate. Chemical analyses indicated that the transgenic rice straw had significantly increased biomass porosity and reduced cellulose features (CrI, DP), which contributed to the largely enhanced biomass enzymatic hydrolysis. In addition, the raised arabinose level in hemicellulose and the lignin H-monomer proportion may also positively affect the biomass enzymatic saccharification in the transgenic rice straw. Hence, this study demonstrated a cost-effective and green lignocellulose conversion technology for high bioethanol production in the transgenic rice straw. It also provided a strategy for the potential genetic modification of plant cell walls in bioenergy crops.

Although cellulose represents the most abundant biomass resource on Earth, its natural recalcitrance hinders its application for low-cost biofuels and high-value bioproducts on a large scale. In this study, we generated less recalcitrant cellulose nanofibril substrates by site-specific mutations and knockouts of three OsCESA4,7,9 isoforms that are essential as cellulose synthase complexes for the cellulose biosynthesis of secondary cell walls in rice. As a comparison with the wild type form, three genetically-engineered CESAs isoforms independently generated cellulose nanofibrils with the average lengths reduced by 63%, which accounts for the high density of the amorphous cellulose chains as the initial breakpoints for the consistently enhanced biomass enzymatic hydrolysis into fermentable sugars. The genetically modified cellulose nanofibrils efficiently produce ideal nanocrystals with the most reduced dimension to-date in three knockout lines, which are applicable as optimal intermediates for highly valuable bioproducts. The improved cellulose nanofibrils are also effective in inducing the secretion of lignocellulose-degradation enzymes from fungi (T. reesei) with the two cellulase (exoglucanases, β-glucosidases) activities elevated by 100% and 138%, and the total protein level increased by 44%. Our data thus reveal a novel green strategy for achieving high-quality diverse bioproduction by integrating the precise genetic modification of lignocellulose substrates with efficient biomass process technology.