Avik Biswas

Dr. Avik Biswas


Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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26 September 2014 in BMC Cancer
Verified
Journal Article
Open access
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MBManikankana Bandopadhyay
Manikankana Bandopadhyay
ABArup Banerjee
Arup Banerjee
NSNeelakshi Sarkar
Neelakshi Sarkar
RPRajesh Panigrahi
Rajesh Panigrahi
SDSibnarayan Datta
Sibnarayan Datta
RCRunu Chakravarty
Runu Chakravarty
Hepatitis B Virus (HBV) X protein (HBx) is known to be involved in the initiation and progression of hepatocellular carcinoma (HCC) through modulation of host gene response. Alterations in miRNA expressions are frequently noted in HCC. This study is aimed to examine the role of HBx protein in the modulation of oncogenic miRNA-21, miRNA-222 and tumor suppressor miRNA-145 in malignant hepatocytes. Expressions of miRNA-21, miRNA-222 and miRNA-145 were measured in HepG2 cells transfected with HBx-plasmid (genotype D) and with full length HBV genome (genotype D) and also in stably HBV producing HepG2.2.15 cells using real time PCR. Their target mRNAs and proteins - PTEN, p27 and MAP3K - were analyzed by real time PCR and western blot respectively. miRNA expressions were measured after HBx/D mRNA specific siRNA treatment. The expressions of these miRNAs were analyzed in liver cirrhosis and HCC patients also. The study revealed a down-regulation of miRNA-21 and miRNA-222 expressions in HBx transfected HepG2 cells, pUC-HBV 1.3 plasmid transfected HepG2 cells as well as in HepG2.2.15 cells. Down regulation of miRNA-21 and miRNA-222 expression was observed in patient serum samples. Down regulation of miRNA-145 expression was observed in HepG2 cells transiently transfected with HBx and pUC-HBV1.3 plasmid as well as in patient samples but the expression of miRNA-145 was increased in HepG2.2.15 cells. Target mRNA and protein expressions were modulated in HepG2 cells and in HepG2.2.15 cell line consistent with the modulation of miRNA expressions. Thus, HBx protein differentially modulated the expression of miRNAs. The study throws light into possible way by which HBx protein acts through microRNA and thereby regulates host functioning. It might suggest new therapeutic strategies against hepatic cancer.

27 August 2010 in Virology Journal
Verified
Journal Article
Open access
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RPRajesh Panigrahi
Rajesh Panigrahi
ABAvik Biswas
Avik Biswas
SDSibnarayan Datta
Sibnarayan Datta
ABArup Banerjee
Arup Banerjee
PCPartha K Chandra
Partha K Chandra
RCRunu Chakravarty
Runu Chakravarty
Background: Occult hepatitis B virus (HBV) infection might transmit viremic units into the public blood supply if only hepatitis B surface antigen (HBsAg) testing is used for donor screening. Our aim was to evaluate the prevalence of occult HBV infection among the HBsAg negative/antiHBc positive donations from a highly HIV prevalent region of India. Methods: A total of 729 HBsAg negative donor units were included in this study. Surface gene and precore region were amplified by in house nucleic acid test (NAT) for detection of occult HBV infection and surface gene was analyzed after direct sequencing. Results: A total of 220 (30.1%) HBsAg negative donors were antiHBc positive, of them 66 (30%) were HBV DNA positive by NAT. HBV DNA positivity among 164 antiHBc only group, was 27.1% and among 40 antiHBs positive group was 30.0%. HBV/D (93.3%) was predominant and prevalence of both HBV/C and HBV/A was 3.3%. Single or multiple amino acids substitutions were found in 95% samples. Conclusion: Thus, a considerable number of HBV infected donors remain undiagnosed, if only HBsAg is used for screening. Addition of antiHBc testing for donor screening, although will lead to rejection of a large number of donor units, will definitely eliminate HBV infected donations and help in reducing HBV transmission with its potential consequences, especially among the immunocompromised population. The HBV genetic diversity found in this donor population are in accordance with other parts of India.

1 December 2008 in Virology
Verified
Journal Article
Closed access
SDSibnarayan Datta
Sibnarayan Datta
ABArup Banerjee
Arup Banerjee
PCPartha Kumar Chandra
Partha Kumar Chandra
ABAvik Biswas
Avik Biswas
RPRajesh Panigrahi
Rajesh Panigrahi
RCRunu Chakravarty
Runu Chakravarty

7 August 2024 in Virology
Verified
Journal Article
Closed access
AKArpita Kar
Arpita Kar
SMSandipan Mukherjee
Sandipan Mukherjee
SMSoumyadeep Mukherjee
Soumyadeep Mukherjee
ABAvik Biswas
Avik Biswas

14 February 2013 in Virology Journal
Verified
Journal Article
Open access
PDF file
RPRajesh Panigrahi
Rajesh Panigrahi
ABAvik Biswas
Avik Biswas
BDBinay Krishna De
Binay Krishna De
SCSekhar Chakrabarti
Sekhar Chakrabarti
RCRunu Chakravarty
Runu Chakravarty
Background: Antiviral therapy using nucleos(t)ide analogues (NAs) is an effective control measure of chronic hepatitis B virus (HBV) infection; however they need long term treatment. Presence of drug-resistance mutations may get in the way of the efficacy of antiviral therapy. Our study was aimed at defining the prevalence of HBV drug-resistance in HBVrt region in a population of 147 HBsAg positive patients. Findings: HBV/D has shown multiple types of HBVrt mutations both among treatment naïve (65.0%, 13 of 20 HBV/D) and treated patients (56.2%, 9 of 16 HBV/D). In additional, several mutations, with a suggested role in drug resistance, were detected among the treatment naïve as well as the treated patients. The mutations reported to be involved in reduction of drug effectiveness, was common among non-responders to therapy as well as among the naïve patients. Notably, classical antiviral resistance mutations (rtL80I/V-rtI169T-rtV173L-rtL180M-rtA181T/V/S-rtT184A/S/G/C-rtA194T-rtS202C /G/I -rtM204V/I-rtN236T-rtM250V) were not detected. Conclusion: The prevalence of putative NAr mutations among non responders to therapy suggests that they might have role in reduced efficacy of currently available antivirals and requires further investigations.

11 July 2023 in Frontiers in Microbiology
Verified
Journal Article
Open access
ABAvik Biswas
Avik Biswas
SDSibnarayan Datta
Sibnarayan Datta
Editorial: Origin and evolution of hepatitis viruses, volume II