Beilei Yuan

Dr. Beilei Yuan

orcid

Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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11 August 2024 in Toxicology
Verified
Journal Article
Closed access
CLChengzhi Liu
Chengzhi Liu
CZCheng Zong
Cheng Zong
SCShuang Chen
Shuang Chen
JCJiangliang Chu
Jiangliang Chu
YYYifan Yang
Yifan Yang
HZHuazhong Zhang
Huazhong Zhang

1 January 2021 in Ecotoxicology and Environmental Safety
Verified
Journal Article
Open access
BYBeilei Yuan
Beilei Yuan
PWPengfei Wang
Pengfei Wang
LSLeqi Sang
Leqi Sang
JGJunhui Gong
Junhui Gong
YPYong Pan
Yong Pan
YHYanhui Hu
Yanhui Hu
The Quantitative Structure-Activity Relationship (QSAR) has been used to investigate organic mixtures but QSAR in the nanomaterial field (QNAR) is still new. Toxicity is a result of the interaction of many substances. QNAR research focuses on a single nanomaterial in the long-term. It is difficult to find an appropriate descriptor to build a model due to the complexity of the mixture. Here, we attempt to build a QNAR model to predict cell viability for HK-2 cells exposed to a mixture containing nano-TiO2 and heavy metals. HK-2 cells were exposed to four groups of mixtures containing heavy-metals and nanomaterials and CCK8 was added to obtain the number of living cells. At the same time, ROS was investigated to study this mechanism. Each descriptor of the components and mixtures were obtained using the formula Dmix= [Formula: see text] respectively. We used the Multiple Partial Least Squares Regression (PLS) and Random Forest Regression (RF) to build a QNAR model. Both models reliably predict and assess viability of HK-2 cells exposed to the mixture. The RF model showed greater stability and higher precision in toxicity predictability and can be applied to environmental nano-toxicology.

16 February 2023 in Toxics
Verified
Journal Article
Open access
PDF file
HZHuazhong Zhang
Huazhong Zhang
JZJinsong Zhang
Jinsong Zhang
JLJinquan Li
Jinquan Li
ZMZhengsheng Mao
Zhengsheng Mao
JQJian Qian
Jian Qian
BYBeilei Yuan
Beilei Yuan
Diquat (DQ), a widely used bipyridyl herbicide, is associated with significantly higher rates of kidney injuries compared to other pesticides. However, the underlying molecular mechanisms are largely unknown. In this study, we identified the molecular changes in the early stage of DQ-induced kidney damage in a mouse model through transcriptomic, proteomic and metabolomic analyses. We identified 869 genes, 351 proteins and 96 metabolites that were differentially expressed in the DQ-treated mice relative to the control mice (p < 0.05), and showed significant enrichment in the PPAR signaling pathway and fatty acid metabolism. Hmgcs2, Cyp4a10, Cyp4a14 and Lpl were identified as the major proteins/genes associated with DQ-induced kidney damage. In addition, eicosapentaenoic acid, linoleic acid, palmitic acid and (R)-3-hydroxybutyric acid were the major metabolites related to DQ-induced kidney injury. Overall, the multi-omics analysis showed that DQ-induced kidney damage is associated with dysregulation of the PPAR signaling pathway, and an aberrant increase in Hmgcs2 expression and 3-hydroxybutyric acid levels. Our findings provide new insights into the molecular basis of DQ-induced early kidney damage.

19 September 2022 in Molecules
Verified
Journal Article
Open access
PDF file
LSLeqi Sang
Leqi Sang
YWYunlin Wang
Yunlin Wang
CZCheng Zong
Cheng Zong
PWPengfei Wang
Pengfei Wang
HZHuazhong Zhang
Huazhong Zhang
Yong PanYong Pan
Yong Pan
With the development and application of nanomaterials, their impact on the environment and organisms has attracted attention. As a common nanomaterial, nano-titanium dioxide (nano-TiO2) has adsorption properties to heavy metals in the environment. Quantitative structure-activity relationship (QSAR) is often used to predict the cytotoxicity of a single substance. However, there is little research on the toxicity of interaction between nanomaterials and other substances. In this study, we exposed human renal cortex proximal tubule epithelial (HK-2) cells to mixtures of eight heavy metals with nano-TiO2, measured absorbance values by CCK-8, and calculated cell viability. PLS and two ensemble learning algorithms are used to build multiple QSAR models for data sets, and the test set R2 is increased from 0.38 to 0.78 and 0.85, and RMSE is decreased from 0.18 to 0.12 and 0.10. After selecting the better random forest algorithm, the K-means clustering algorithm is used to continue to optimize the model, increasing the test set R2 to 0.95 and decreasing the RMSE to 0.08 and 0.06. As a reliable machine algorithm, random forest can be used to predict the toxicity of the mixture of nano-metal oxides and heavy metals. The cluster analysis can effectively improve the stability and predictability of the model, and provide a new idea for the prediction of cytotoxicity model in the future.

30 May 2024 in Toxics
Verified
Journal Article
Open access
PDF file
CLChengzhi Liu
Chengzhi Liu
SCShuang Chen
Shuang Chen
JCJiangliang Chu
Jiangliang Chu
YYYifan Yang
Yifan Yang
BYBeilei Yuan
Beilei Yuan
HZHuazhong Zhang
Huazhong Zhang
Polyvinyl chloride microplastics (PVC-MPs) are microplastic pollutants widely present in the environment, but their potential risks to human lung health and underlying toxicity mechanisms remain unknown. In this study, we systematically analyzed the effects of PVC-MPs on the transcriptome and metabolome of BEAS-2B cells using high-throughput RNA sequencing and untargeted metabolomics technologies. The results showed that exposure to PVC-MPs significantly reduced the viability of BEAS-2B cells, leading to the differential expression of 530 genes and 3768 metabolites. Further bioinformatics analyses showed that PVC-MP exposure influenced the expression of genes associated with fluid shear stress, the MAPK and TGF-β signaling pathways, and the levels of metabolites associated with amino acid metabolism. In particular, integrated pathway analysis showed that lipid metabolic pathways (including glycerophospholipid metabolism, glycerolipid metabolism, and sphingolipid metabolism) were significantly perturbed in BEAS-2B cells following PVC-MPs exposure. This study provides new insights and targets for a deeper understanding of the toxicity mechanism of PVC-MPs and for the prevention and treatment of PVC-MP-associated lung diseases.

20 January 2024 in Environmental Pollution
Verified
Journal Article
Closed access
KCKaixiao Cheng
Kaixiao Cheng
Yong PanYong Pan
Yong Pan
BYBeilei Yuan
Beilei Yuan