Sean Tachibana

Mr. Sean Tachibana

orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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2 May 2021 in Chemistry – A European Journal
Verified
Journal Article
Closed access
PDF file
CCCheng Chen
Cheng Chen
STSean Tachibana
Sean Tachibana
NBNadezhda S. Baleeva
Nadezhda S. Baleeva
IMIvan Myasnyanko
Ivan Myasnyanko
ABAlexey Bogdanov
Alexey Bogdanov
CFChong Fang
Chong Fang

1 April 2021 in Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy
Verified
Journal Article
Closed access
STSean Tachibana
Sean Tachibana
LTLongteng Tang
Longteng Tang
CCCheng Chen
Cheng Chen
LZLiangdong Zhu
Liangdong Zhu
YTYuka Takeda
Yuka Takeda
CFChong Fang
Chong Fang

Verified
Journal Article
Open access
PDF file
STSean Tachibana
Sean Tachibana
LTLongteng Tang
Longteng Tang
LZLiangdong Zhu
Liangdong Zhu
YTYuka Takeda
Yuka Takeda
KFKeiji Fushimi
Keiji Fushimi
CFChong Fang
Chong Fang
Cyanobacteriochromes (CBCRs) are promising optogenetic tools for their diverse absorption properties with a single compact cofactor-binding domain. We previously uncovered the ultrafast reversible photoswitching dynamics of a red/green photoreceptor AnPixJg2, which binds phycocyanobilin (PCB) that is unavailable in mammalian cells. Biliverdin (BV) is a mammalian cofactor with a similar structure to PCB but exhibits redder absorption. To improve the AnPixJg2 feasibility in mammalian applications, AnPixJg2_BV4 with only four mutations has been engineered to incorporate BV. Herein, we implemented femtosecond transient absorption (fs-TA) and ground state femtosecond stimulated Raman spectroscopy (GS-FSRS) to uncover transient electronic dynamics on molecular time scales and key structural motions responsible for the photoconversion of AnPixJg2_BV4 with PCB (Bpcb) and BV (Bbv) cofactors in comparison with the parent AnPixJg2 (Apcb). Bpcb adopts the same photoconversion scheme as Apcb, while BV4 mutations create a less bulky environment around the cofactor D ring that promotes a faster twist. The engineered Bbv employs a reversible clockwise/counterclockwise photoswitching that requires a two-step twist on ~5 and 35 picosecond (ps) time scales. The primary forward Pfr → Po transition displays equal amplitude weights between the two processes before reaching a conical intersection. In contrast, the primary reverse Po → Pfr transition shows a 2:1 weight ratio of the ~35 ps over 5 ps component, implying notable changes to the D-ring-twisting pathway. Moreover, we performed pre-resonance GS-FSRS and quantum calculations to identify the Bbv vibrational marker bands at ~659,797, and 1225 cm−1. These modes reveal a stronger H-bonding network around the BV cofactor A ring with BV4 mutations, corroborating the D-ring-dominant reversible photoswitching pathway in the excited state. Implementation of BV4 mutations in other PCB-binding GAF domains like AnPixJg4, AM1_1870g3, and NpF2164g5 could promote similar efficient reversible photoswitching for more directional bioimaging and optogenetic applications, and inspire other bioengineering advances.