Nemanja Mirkovic

Dr. Nemanja Mirkovic


Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 November 2017 in Applied and Environmental Microbiology
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Journal Article
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Jelena Lozo,Jelena Lozo,
Jelena Lozo,
NMNemanja Mirkovic
Nemanja Mirkovic
POPaula M. O'COnnor
Paula M. O'COnnor
MMMilka Malesevic
Milka Malesevic
MMMarija Miljkovic
Marija Miljkovic
MKMilan Kojić
Milan Kojić
Lactococcus lactis subsp. lactis bv. diacetylactis BGBU1-4 produces a novel bacteriocin, lactolisterin BU, with strong antimicrobial activity against many species of Gram-positive bacteria, including important food spoilage and foodborne pathogens, such as Listeria monocytogenes , Staphylococcus aureus , Bacillus spp., and streptococci. Lactolisterin BU was extracted from the cell surface of BGBU1-4 by 2-propanol and purified to homogeneity by C 18 solid-phase extraction and reversed-phase high-performance liquid chromatography. The molecular mass of the purified lactolisterin BU was 5,160.94 Da, and an internal fragment, AVSWAWQH, as determined by N-terminal sequencing, showed low-level similarity to existing antimicrobial peptides. Curing and transformation experiments revealed the presence of a corresponding bacteriocin operon on the smallest plasmid, pBU6 (6.2 kb), of strain BGBU1-4. Analysis of the bacteriocin operon revealed a leaderless bacteriocin of 43 amino acids that exhibited similarity to bacteriocin BHT-B (63%) from Streptococcus ratti , a bacteriocin with analogy to aureocin A. IMPORTANCE Lactolisterin BU, a broad-spectrum leaderless bacteriocin produced by L. lactis subsp. lactis bv. diacetylactis BGBU1-4, expresses strong antimicrobial activity against food spoilage and foodborne pathogens, such as Listeria monocytogenes , Staphylococcus aureus , Bacillus spp., and streptococci. Lactolisterin BU showed the highest similarity to aureocin-like bacteriocins produced by different bacteria. The operon for synthesis is located on the smallest plasmid, pBU6 (6.2 kb), of strain BGBU1-4, indicating possible horizontal transfer among producers.

15 April 2016 in Applied and Environmental Microbiology
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NMNemanja Mirkovic
Nemanja Mirkovic
NPNatalija Polovic
Natalija Polovic
GVGoran Vukotić
Goran Vukotić
BJBranko Jovcic
Branko Jovcic
MMMarija Miljkovic
Marija Miljkovic
MKMilan Kojić
Milan Kojić
Bacteriocin producers normally possess dedicated immunity systems to protect themselves from their own bacteriocins. Lactococcus lactis strains LMG2081 and BGBM50 are known as lactococcin G producers. However, BGBM50 was sensitive to LMG2081, which indicated that LMG2081 might produce additional bacteriocins that are not present in BGBM50. Therefore, whole-genome sequencing of the two strains was performed, and a lantibiotic operon (called lctLMG ) was identified in LMG2081 but not in BGBM50. The lctLMG operon contains six open reading frames; the first three genes, lmgA , lmgM , and lmgT , are involved in the biosynthesis and export of bacteriocin, while the other three genes, lmgF , lmgE , and lmgG , are involved in lantibiotic immunity. Mutational analysis confirmed that the lctLMG operon is responsible for the additional antimicrobial activity. Specifically, site-directed mutation within this operon rendered LMG2081 inactive toward BGBM50. Subsequent purification and electrospray ionization–time of flight mass spectrometric analysis confirmed that the lantibiotic bacteriocin called lacticin LMG is exported as a 25-amino-acid peptide. Lacticin LMG is highly similar to the lacticin 481 group. It is interesting that a bacteriocin producer produces two different classes of bacteriocins, whose operons are located in the chromosome and a plasmid.

1 April 2015 in Science of The Total Environment
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Journal Article
Closed access
KNK. Novovic
K. Novovic
BFB. Filipic
B. Filipic
KVK. Veljovic
K. Veljovic
JBJ. Begovic
J. Begovic
NMNemanja Mirkovic
Nemanja Mirkovic
BJBranko Jovcic
Branko Jovcic

19 June 2017 in Animal Science Journal
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ZRZorica Radulović
Zorica Radulović
JMJelena Miocinovic
Jelena Miocinovic
NMNemanja Mirkovic
Nemanja Mirkovic
MMMilica Mirković
Milica Mirković
DPDušanka Paunović
Dušanka Paunović
SSSanja Seratlić
Sanja Seratlić

1 September 2016 in Applied and Environmental Microbiology
Verified
Journal Article
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MMMarija Miljkovic
Marija Miljkovic
GUGordana Uzelac
Gordana Uzelac
NMNemanja Mirkovic
Nemanja Mirkovic
GDGiulia Devescovi
Giulia Devescovi
DDDzung B. Diep
Dzung B. Diep
MKMilan Kojić
Milan Kojić
The Zn-dependent membrane-located protease YvjB has previously been shown to serve as a target receptor for LsbB, a class II leaderless lactococcal bacteriocin. Although yvjB is highly conserved in the genus Lactococcus , the bacteriocin appears to be active only against the subspecies L. lactis subsp. lactis . Comparative analysis of the YvjB proteins of a sensitive strain (YvjB MN ) and a resistant strain (YvjB MG ) showed that they differ from each other in 31 positions. In this study, we applied site-directed mutagenesis and performed directed binding studies to provide biochemical evidence that LsbB interacts with the third transmembrane helix of YvjB in susceptible cells. The site-directed mutagenesis of LsbB and YvjB proteins showed that certain amino acids and the length of LsbB are responsible for the bacteriocin activity, most probably through adequate interaction of these two proteins; the essential amino acids in LsbB responsible for the activity are tryptophan (Trp 25 ) and terminal alanine (Ala 30 ). It was also shown that the distance between Trp 25 and terminal alanine is crucial for LsbB activity. The crucial region in YvjB for the interaction with LsbB is the beginning of the third transmembrane helix, particularly amino acids tyrosine (Tyr 356 ) and alanine (Ala 353 ). In vitro experiments showed that LsbB could interact with both YvjB MN and YvjB MG , but the strength of interaction is significantly less with YvjB MG . In vivo experiments with immunofluorescently labeled antibody demonstrated that LsbB specifically interacts only with cells carrying YvjB MN . IMPORTANCE The antimicrobial activity of LsbB bacteriocin depends on the correct interaction with the corresponding receptor in the bacterial membrane of sensitive cells. Membrane-located bacteriocin receptors have essential primary functions, such as cell wall synthesis or sugar transport, and it seems that interaction with bacteriocins is suicidal for cells. This study showed that the C-terminal part of LsbB is crucial for the bacteriocin activity, most probably through adequate interaction with the third transmembrane domain of the YvjB receptor. The conserved Tyr 356 and Ala 353 residues of YvjB are essential for the function of this Zn-dependent membrane-located protease as a bacteriocin receptor.

24 December 2019 in Food Control
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Journal Article
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NMNemanja Mirkovic
Nemanja Mirkovic
JKJelena Kulas
Jelena Kulas
ZMZorana Miloradovic
Zorana Miloradovic
MMMarija Miljkovic
Marija Miljkovic
DTDina Tucovic
Dina Tucovic
MKMilan Kojić
Milan Kojić