Chandan Roy

Dr. Chandan Roy

Assistant Professor cum Junior Scientist
orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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8 November 2022 in Frontiers in Genetics
Verified
Journal Article
Open access
Chandan RoyChandan Roy
Chandan Roy
SKsudhir kumar
sudhir kumar
RRRakesh Deo Ranjan
Rakesh Deo Ranjan
SKSita Ram Kumhar
Sita Ram Kumhar
VGvelu govindan
velu govindan
More than three billion people worldwide suffer from iron deficiency associated anemia and an equal number people suffer from zinc deficiency. These conditions are more prevalent in Sub-Saharan Africa and South Asia. In developing countries, children under the age of five with stunted growth and pregnant or lactating women were found to be at high risk of zinc and iron deficiencies. Biofortification, defined as breeding to develop varieties of staple food crops whose grain contains higher levels of micronutrients such as iron and zinc, are one of the most promising, cost-effective and sustainable ways to improve the health in resource-poor households, particularly in rural areas where families consume some part of what they grow. Biofortification through conventional breeding in wheat, particularly for grain zinc and iron, have made significant contributions, transferring important genes and quantitative trait loci (QTLs) from wild and related species into cultivated wheat. Nonetheless, the quantitative, genetically complex nature of iron and zinc levels in wheat grain limits progress through conventional breeding, making it difficult to attain genetic gain both for yield and grain mineral concentrations. Wheat biofortification can be achieved by enhancing mineral uptake, source-to-sink translocation of minerals and their deposition into grains, and the bioavailability of the minerals. A number of QTLs with major and minor effects for those traits have been detected in wheat; introducing the most effective into breeding lines will increase grain zinc and iron concentrations. New approaches to achieve this include marker assisted selection and genomic selection. Faster breeding approaches need to be combined to simultaneously increase grain mineral content and yield in wheat breeding lines.

14 April 2021 in Czech Journal of Genetics and Plant Breeding
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Journal Article
Open access
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MNM.C. Narendra
M.C. Narendra
Chandan RoyChandan Roy
Chandan Roy
SKSudhir Kumar
Sudhir Kumar
PVParminder Virk
Parminder Virk
NDNitish De
Nitish De
Effect of terminal heat stress on physiological traits, grain zinc and iron content in wheat (Triticum aestivum L.) | Narendra M.C., Chandan Roy, Sudhir Kumar, Parminder Virk, Nitish De | Agricultural Journals

14 September 2021 in Czech Journal of Genetics and Plant Breeding
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Journal Article
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Chandan RoyChandan Roy
Chandan Roy
TCTirthartha Chattopadhyay
Tirthartha Chattopadhyay
RRRakesh Deo Ranjan
Rakesh Deo Ranjan
WHWahid Ul Hasan
Wahid Ul Hasan
AKAbhishek Kumar
Abhishek Kumar
NDNitish De
Nitish De
Association of leaf chlorophyll content with the stay-green trait and grain yield in wheat grown under heat stress conditions | Chandan Roy, Tirthartha Chattopadhyay, Rakesh Deo Ranjan, Wahid Ul Hasan, Abhishek Kumar, Nitish De | Agricultural Journals

4 March 2021 in Frontiers in Plant Science
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Journal Article
Open access
Chandan RoyChandan Roy
Chandan Roy
NGNavin C. Gahtyari
Navin C. Gahtyari
XHXinyao He
Xinyao He
VMVinod K. Mishra
Vinod K. Mishra
RCRamesh Chand
Ramesh Chand
PSPawan Kumar Singh
Pawan Kumar Singh
Spot blotch (SB) disease causes significant yield loss in wheat production in the warm and humid regions of the eastern Gangetic plains (EGP) of South Asia (SA). Most of the cultivated varieties in the eastern part of SA are affected by SB under favorable climatic conditions. To understand the nature of SB resistance and map the underlying resistant loci effective in SA, two bi-parental mapping populations were evaluated for 3 years, i.e., 2013–2015 for the BARTAI × CIANO T79 population (denoted as BC) and 2014–2016 for the CASCABEL × CIANO T79 population (CC), at Varanasi, Uttar Pradesh, India. DArTSeq genotyping-by-sequencing (GBS) platform was used for genotyping of the populations. Distribution of disease reaction of genotypes in both populations was continuous, revealing the quantitative nature of resistance. Significant “genotype,” “year,” and “genotype × year” interactions for SB were observed. Linkage map with the genome coverage of 8,598.3 and 9,024.7 cM in the BC and CC population, respectively, was observed. Two quantitative trait loci (QTLs) were detected on chromosomes 1A and 4D in the BC population with an average contribution of 4.01 and 12.23% of the total phenotypic variation (PV), respectively. Seven stable QTLs were detected on chromosomes 1B, 5A, 5B, 6A, 7A, and 7B in the CC population explaining 2.89–10.32% of PV and collectively 39.91% of the total PV. The QTL detected at the distal end of 5A chromosome contributed 10.32% of the total PV. The QTLs on 6A and 7B in CC could be new, and the one on 5B may represent the Sb2 gene. These QTLs could be used in SB resistance cultivar development for SA.

13 May 2021 in Plants
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Journal Article
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NGNavin Chander Gahtyari
Navin Chander Gahtyari
Chandan RoyChandan Roy
Chandan Roy
XHXinyao He
Xinyao He
KRKrishna Kanta Roy
Krishna Kanta Roy
MRMostafa Ali Reza
Mostafa Ali Reza
PSPawan Kumar Singh
Pawan Kumar Singh
Spot blotch (SB) disease caused by the hemibiotrophic pathogen Bipolaris sorokiniana inflicting major losses to the wheat grown in warm and highly humid areas of the Indian subcontinent, including Bangladesh, necessitates identification of QTLs stably expressing in Indian subcontinent conditions. Thus, two RIL mapping populations, i.e., WC (WUYA × CIANO T79) and KC (KATH × CIANO T79), were phenotyped at Dinajpur, Bangladesh for three consecutive years (2013-2015) and genotyped on a DArTseq genotyping by sequencing (GBS) platform at CIMMYT, Mexico. In both populations, quantitative inheritance along with transgressive segregation for SB resistance was identified. The identified QTLs were mostly minor and were detected on 10 chromosomes, i.e., 1A, 1B, 2A, 2B, 2D, 4B, 4D, 5A, 5D, and 7B. The phenotypic variation explained by the identified QTLs ranged from 2.3–15.0%, whereby QTLs on 4B (13.7%) and 5D (15.0%) were the largest in effect. The identified QTLs upon stacking showed an additive effect in lowering the SB score in both populations. The probable presence of newly identified Sb4 and durable resistance gene Lr46 in the identified QTL regions indicates the importance of these genes in breeding for SB resistance in Bangladesh and the whole of South Asia.

27 March 2022 in Genes
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Journal Article
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RPRahul Madhavrao Phuke
Rahul Madhavrao Phuke
XHXinyao He
Xinyao He
PJPhilomin Juliana
Philomin Juliana
MKMd. Rezaul Kabir
Md. Rezaul Kabir
KRKrishna Kanta Roy
Krishna Kanta Roy
PSPawan Kumar Singh
Pawan Kumar Singh
Wheat blast (WB) is a devastating fungal disease that has recently spread to Bangladesh and poses a threat to the wheat production in India, which is the second-largest wheat producing country in the world. In this study, 350 Indian wheat genotypes were evaluated for WB resistance in 12 field experiments in three different locations, namely Jashore in Bangladesh and Quirusillas and Okinawa in Bolivia. Single nucleotide polymorphisms (SNPs) across the genome were obtained using DArTseq® technology, and 7554 filtered SNP markers were selected for a genome-wide association study (GWAS). All the three GWAS approaches used identified the 2NS translocation as the only major source of resistance, explaining up to 32% of the phenotypic variation. Additional marker-trait associations were located on chromosomes 2B, 3B, 4D, 5A and 7A, and the combined effect of three SNPs (2B_180938790, 7A_752501634 and 5A_618682953) showed better resistance, indicating their additive effects on WB resistance. Among the 298 bread wheat genotypes, 89 (29.9%) carried the 2NS translocation, the majority of which (60 genotypes) were CIMMYT introductions, and 29 were from India. The 2NS carriers with a grand mean WB index of 6.6 showed higher blast resistance compared to the non-2NS genotypes with a mean index of 46.5. Of the 52 durum wheats, only one genotype, HI 8819, had the 2NS translocation and was the most resistant, with a grand mean WB index of 0.93. Our study suggests that the 2NS translocation is the only major resistance source in the Indian wheat panel analysed and emphasizes the urgent need to identify novel non-2NS resistance sources and genomic regions.