Images produced by ultrasound systems are adversely hampered by a stochastic process known as speckle. A despeckling method based upon removing outlier is proposed. The method is developed to contrast enhance B-mode ultrasound images. The contrast enhancement is with respect to decreasing pixel variations in homogeneous regions while maintaining or improving differences in mean values of distinct regions. A comparison of the proposed despeckling filter is compared with the other well known despeckling filters. The evaluations of despeckling performance are based upon improvements to contrast enhancement, structural similarity, and segmentation results on a Field II simulated image and actual B-mode cardiac ultrasound images captured in vivo .

Glioblastoma (GBM), a highly aggressive form of brain tumor, is a disease marked by extensive invasion into the surrounding brain. Interstitial fluid flow (IFF), or the movement of fluid within the spaces between cells, has been linked to increased invasion of GBM cells. Better characterization of IFF could elucidate underlying mechanisms driving this invasion in vivo. Here, we develop a technique to non-invasively measure interstitial flow velocities in the glioma microenvironment of mice using dynamic contrast-enhanced magnetic resonance imaging (MRI), a common clinical technique. Using our in vitro model as a phantom “tumor” system and in silico models of velocity vector fields, we show we can measure average velocities and accurately reconstruct velocity directions. With our combined MR and analysis method, we show that velocity magnitudes are similar across four human GBM cell line xenograft models and the direction of fluid flow is heterogeneous within and around the tumors, and not always in the outward direction. These values were not linked to the tumor size. Finally, we compare our flow velocity magnitudes and the direction of flow to a classical marker of vessel leakage and bulk fluid drainage, Evans blue. With these data, we validate its use as a marker of high and low IFF rates and IFF in the outward direction from the tumor border in implanted glioma models. These methods show, for the first time, the nature of interstitial fluid flow in models of glioma using a technique that is translatable to clinical and preclinical models currently using contrast-enhanced MRI.

In this paper we present a new diffusion-based method for the delineation of coastlines from space-borne polarimetric SAR imagery of coastal urban areas. Both polarimetric filtering and speckle reducing anisotropic diffusion (SRAD) are exploited to generate a base image where speckle is reduced and edges are enhanced. The primary edge information is then derived from the base image using the instantaneous coefficient of variation edge detector. Next, the resulting edge image is parsed by a watershed transform, which partitions the image into disjoint segments where the division lines between segments are collocated with detected edges. The over-segmentation problem associated with the watershed transform is solved by a region merging technique that combines neighbouring segments with similar radar brightness. As a result, undesired boundary segments are eliminated and true coastlines are correctly delineated. The proposed algorithm has been applied to a space-borne polarimetric SAR dataset, demonstrating a good visual match between the detected coastline and the manually contoured coastline. The performance of the proposed algorithm is compared with those of two polarimetric SAR classification algorithms and two edge-based shoreline detection methods that are tailored to single polarization SAR images. Experimental results are shown using polarimetric SAR data from Hong Kong.

Background and Purpose: Ischemic injury triggers multiple pathological responses in the brain tissue, including spreading depolarizations across the cerebral cortex (cortical spreading depolarizations [CSD]). Microglia have been recently shown to play a significant role in the propagation of CSD. However, the intracellular responses of myeloid cells during ischemic stroke have not been investigated. Methods: We have studied intracellular calcium activity in cortical microglia in the stroke model of the middle cerebral artery occlusion, using the murine Polr2a-based and Cre-dependent GCaMP5 and tdTomato reporter (PC::G5-tdT). High-speed 2-photon microscopy through cranial windows was employed to record signals from genetically encoded indicators of calcium. Inflammatory stimuli and pharmacological inhibition were used to modulate microglial calcium responses in the somatosensory cortex. Results: In vivo imaging revealed periodical calcium activity in microglia during the hyperacute phase of ischemic stroke. This activity was more frequent during the first 6 hours after occlusion, but the amplitudes of calcium transients became larger at later time points. Consistent with CSD nature of these events, we reproducibly triggered comparable calcium transients with microinjections of potassium chloride (KCl) into adjacent cortical areas. Furthermore, lipopolysaccharide-induced peripheral inflammation, mimicking sterile inflammation during ischemic stroke, produced significantly greater microglial calcium transients during CSD. Finally, in vivo pharmacological analysis with CRAC (calcium release-activated channel) inhibitor CM-EX-137 demonstrated that CSD-associated microglial calcium transients after KCl microinjections are mediated at least in part by the CRAC mechanism. Conclusions: Our findings demonstrate that microglia participate in ischemic brain injury via previously undetected mechanisms, which may provide new avenues for therapeutic interventions.

In image classification, obtaining adequate data to learn a robust classifier has often proven to be difficult in several scenarios. Classification of histological tissue images for health care analysis is a notable application in this context due to the necessity of surgery, biopsy or autopsy. To adequately exploit limited training data in classification, we propose a saliency guided dictionary learning method and subsequently an image similarity technique for histo-pathological image classification. Salient object detection from images aids in the identification of discriminative image features. We leverage the saliency values for the local image regions to learn a dictionary and respective sparse codes for an image, such that the more salient features are reconstructed with smaller error. The dictionary learned from an image gives a compact representation of the image itself and is capable of representing images with similar content, with comparable sparse codes. We employ this idea to design a similarity measure between a pair of images, where local image features of one image, are encoded with the dictionary learned from the other and vice versa. To effectively utilize the learned dictionary, we take into account the contribution of each dictionary atom in the sparse codes to generate a global image representation for image comparison. The efficacy of the proposed method was evaluated using three tissue data sets that consist of mammalian kidney, lung and spleen tissue, breast cancer, and colon cancer tissue images. From the experiments, we observe that our methods outperform the state of the art with an increase of 14.2% in the average classification accuracy over all data sets.

Robust and accurate scale estimation of a target object is a challenging task in visual object tracking. Most existing tracking methods cannot accommodate large scale variation in complex image sequences and thus result in inferior performance. In this paper, we propose to incorporate a novel criterion called the average peak-to-correlation energy into the multi-resolution translation filter framework to obtain robust and accurate scale estimation. The resulting system is named SITUP: Scale Invariant Tracking using Average Peak-to-Correlation Energy. SITUP effectively tackles the problem of fixed template size in standard discriminative correlation filter based trackers. Extensive empirical evaluation on the publicly available tracking benchmark datasets demonstrates that the proposed scale searching framework meets the demands of scale variation challenges effectively while providing superior performance over other scale adaptive variants of standard discriminative correlation filter based trackers. Also, SITUP obtains favorable performance compared to state-of-the-art trackers for various scenarios while operating in real-time on a single CPU.