Anna Szpakowicz

Prof. Anna Szpakowicz


Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 October 2021 in Journal of Clinical Medicine
Verified
Journal Article
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ESEmilia Sawicka
Emilia Sawicka
KBKinga Bondarczuk
Kinga Bondarczuk
WBWitold Bauer
Witold Bauer
MNMagdalena Niemira
Magdalena Niemira
ASAnna Szalkowska
Anna Szalkowska
Karol Adam KaminskiKarol Adam Kaminski
Karol Adam Kaminski
Despite knowledge of classical coronary artery disease (CAD) risk factors, the morbidity and mortality associated with this disease remain high. Therefore, new factors that may affect the development of CAD, such as the gut microbiome, are extensively investigated. This study aimed to evaluate gut microbiome composition in CAD patients in relation to the control group. We examined 169 CAD patients and 166 people in the control group, without CAD, matched in terms of age and sex to the study group. Both populations underwent a detailed health assessment. The microbiome analysis was based on the V3–V4 region of the 16S rRNA gene (NGS method). Among 4074 identified taxonomic units in the whole population, 1070 differed between study groups. The most common bacterial types were Firmicutes, Bacteroidetes, Proteobacteria, and Actinobacteria. Furthermore, a higher Firmicutes/Bacteroidetes ratio in the CAD group compared with the control was demonstrated. Firmicutes/Bacteroidetes ratio, independent of age, sex, CAD status, LDL cholesterol concentration, and statins treatment, was related to altered phosphatidylcholine concentrations obtained in targeted metabolomics. Altered alpha-biodiversity (Kruskal–Wallis test, p = 0.001) and beta-biodiversity (Bray–Curtis metric, p < 0.001) in the CAD group were observed. Moreover, a predicted functional analysis revealed some taxonomic units, metabolic pathways, and proteins that might be characteristic of the CAD patients’ microbiome, such as increased expressions of 6-phospho-β-glucosidase and protein-N(pi)-phosphohistidine-sugar phosphotransferase and decreased expressions of DNA topoisomerase, oxaloacetate decarboxylase, and 6-beta-glucosidase. In summary, CAD is associated with altered gut microbiome composition and function.

1 December 2015 in Cytokine
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Journal Article
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MJMałgorzata Jasiewicz
Małgorzata Jasiewicz
Małgorzata A. KnappMałgorzata A. Knapp
Małgorzata A. Knapp
EWEwa Waszkiewicz
Ewa Waszkiewicz
KPKatarzyna Ptaszynska
Katarzyna Ptaszynska
ASAnna Szpakowicz
Anna Szpakowicz
Karol Adam KaminskiKarol Adam Kaminski
Karol Adam Kaminski

1 May 2018 in Journal of Pharmaceutical and Biomedical Analysis
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Journal Article
Closed access
MMM. Marcinkiewicz-Siemion
M. Marcinkiewicz-Siemion
Michal CiborowskiMichal Ciborowski
Michal Ciborowski
KPK. Ptaszynska-Kopczynska
K. Ptaszynska-Kopczynska
ASAnna Szpakowicz
Anna Szpakowicz
ALA. Lisowska
A. Lisowska
Karol Adam KaminskiKarol Adam Kaminski
Karol Adam Kaminski

1 October 2017 in Circulation: Cardiovascular Genetics
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Journal Article
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YHYi-Juan Hu
Yi-Juan Hu
ASAmand Schmidt
Amand Schmidt
FDFrank Dudbridge
Frank Dudbridge
MHMichael V. Holmes
Michael V. Holmes
JBJames M. Brophy
James M. Brophy
AWArthur A.M. Wilde
Arthur A.M. Wilde
Background—: Studies of recurrent or subsequent disease events may be susceptible to bias caused by selection of subjects who both experience and survive the primary indexing event. Currently, the magnitude of any selection bias, particularly for subsequent time-to-event analysis in genetic association studies, is unknown. Methods and Results—: We used empirically inspired simulation studies to explore the impact of selection bias on the marginal hazard ratio for risk of subsequent events among those with established coronary heart disease. The extent of selection bias was determined by the magnitudes of genetic and nongenetic effects on the indexing (first) coronary heart disease event. Unless the genetic hazard ratio was unrealistically large (>1.6 per allele) and assuming the sum of all nongenetic hazard ratios was <10, bias was usually <10% (downward toward the null). Despite the low bias, the probability that a confidence interval included the true effect decreased (undercoverage) with increasing sample size because of increasing precision. Importantly, false-positive rates were not affected by selection bias. Conclusions—: In most empirical settings, selection bias is expected to have a limited impact on genetic effect estimates of subsequent event risk. Nevertheless, because of undercoverage increasing with sample size, most confidence intervals will be over precise (not wide enough). When there is no effect modification by history of coronary heart disease, the false-positive rates of association tests will be close to nominal.

15 July 2015 in Polish Archives of Internal Medicine
Verified
Journal Article
Closed access
MKMarek Kiliszek
Marek Kiliszek
ASAnna Szpakowicz
Anna Szpakowicz
KFKrzysztof J. Filipiak
Krzysztof J. Filipiak
ŁKŁukasz Kołtowski
Łukasz Kołtowski
DPDominika Południewska
Dominika Południewska
GOGrzegorz Opolski
Grzegorz Opolski
The CHA2DS2-VASc and R2CHA2DS2-VASc scoring systems were designed to stratify thromboembolic risk in patients with atrial fibrillation. The R2CHA2DS2-VASc score, compared with the CHA2DS2-VASc, was modified by adding reduced creatinine clearance. The aim of the study was to assess the long-term predictive value of these scores in patients with acute coronary syndrome (ACS) and to compare their utility with TIMI and GRACE scores in this patient group. We performed a pooled analysis of 5 independent populations with ACS with a long-term follow-up available. The primary endpoint was defined as all-cause mortality. The following risk scores were calculated: TIMI-STEMI or TIMI-NSTEMI, GRACE, CHA2DS2-VASc, and R2CHA2DS2-VASc A total of 2557 patients were included in the final analysis with a median follow-up of about 5 years. The CHA2DS2-VASc and R2CHA2DS2 -VASc scores were significant predictors of total mortality in the pooled analysis. After correction for heart rate and systolic blood pressure on admission as well as previous myocardial infarction, the scores were still significantly predictive of mortality (hazard ratio [HR], 1.47; 95% confidence interval [CI], 1.39–1.54; P <0.0001 for CHA2DS2-VASc; and HR, 1.41; 95%CI, 1.35–1.47; P <0.0001 for R2CHA2DS2-VASc). At all time points (1, 3, and 5 years), the TIMI-STEMIscore was a significantly better predictor than the CHA2DS2-VASc and R2CHA2DS2-VASc scores. The predictive value of the R2CHA2DS2-VASc score was comparable to that of the GRACE score at 3 and 5 years. The CHA2DS2-VASc and R2CHA2DS2-VASc scores are significant predictors of all-cause mortality in a long-term follow-up in patients with ACS. These simple risk scores may be easily applied in clinical practice in this patient group.

8 August 2014 in PLOS ONE
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ASAnna Szpakowicz
Anna Szpakowicz
MKMarek Kiliszek
Marek Kiliszek
WPWitold Pepinski
Witold Pepinski
EWEwa Waszkiewicz
Ewa Waszkiewicz
MFMaria Franaszczyk
Maria Franaszczyk
Karol Adam KaminskiKarol Adam Kaminski
Karol Adam Kaminski
The rs10757278, rs1333049 and rs4977574 are single nucleotide polymorphisms (SNPs) of chromosome 9p21 locus associated with a prevalence of acute coronary syndromes (ACS). Reports concerning their association with long-term outcome after an ACS are equivocal. The aim of our study was to investigate the association of the 9p21.3 locus with 5-year overall mortality in patients with ST-elevation myocardial infarction (STEMI). We performed a retrospective analysis of data collected prospectively in 2 independent registries of consecutive patients with STEMI (derivation and validation group). Genotyping was performed with the TaqMan method. The analyzed end-point was total mortality. The derivation group comprised 589 patients: 25.3% female (n = 149), mean age 62.4±12.0 years, total 5-year mortality 16.6% (n = 98). When all the study group was analyzed, no significant differences in mortality were found between the genotypes. However, in high-risk patients (GRACE risk score ≥155 points, n = 238), homozygotes associated with higher risk for ACS had significantly better 5-year survival compared to other genotypes. The hazard ratio associated with the high-risk genotype (a homozygote of high risk for ACS or a heterozygote) was: HR = 2.2 (1.15–4.2) for the rs10757278 polymorphism, HR = 2.7 (95% CI 1.3–5.4) for the rs4977574 one and HR = 2.3 (1.2–4.5) for the rs1333049 one (Cox proportional hazards model). Survival analysis in the validation group (n = 365) showed a clear trend towards better prognosis in GG homozygotes of the rs10757278 SNP, which confirms our initial results (p = 0.09, log-rank test). The 9p21.3 locus is associated with 5-year mortality in high-risk patients with STEMI. The genotypes associated with higher risk for ACS show a protective effect in terms of further survival (instead of a deteriorating prognosis, as reported previously). This finding, due to the very high size of the effect, could potentially be applied to clinical practice, if appropriate methods are elaborated.