Ekaterina Kholodareva

Ms. Ekaterina Kholodareva


Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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31 August 2021 in Viruses
Verified
Journal Article
Open access
PDF file
DGDmitry Grebennikov
Dmitry Grebennikov
EKEkaterina Kholodareva
Ekaterina Kholodareva
ISIgor Sazonov
Igor Sazonov
AKAntonina Karsonova
Antonina Karsonova
AMAndreas Meyerhans
Andreas Meyerhans
GBGennady Bocharov
Gennady Bocharov
SARS-CoV-2 infection represents a global threat to human health. Various approaches were employed to reveal the pathogenetic mechanisms of COVID-19. Mathematical and computational modelling is a powerful tool to describe and analyze the infection dynamics in relation to a plethora of processes contributing to the observed disease phenotypes. In our study here, we formulate and calibrate a deterministic model of the SARS-CoV-2 life cycle. It provides a kinetic description of the major replication stages of SARS-CoV-2. Sensitivity analysis of the net viral progeny with respect to model parameters enables the identification of the life cycle stages that have the strongest impact on viral replication. These three most influential parameters are (i) degradation rate of positive sense vRNAs in cytoplasm (negative effect), (ii) threshold number of non-structural proteins enhancing vRNA transcription (negative effect), and (iii) translation rate of non-structural proteins (positive effect). The results of our analysis could be used for guiding the search for antiviral drug targets to combat SARS-CoV-2 infection.