Simon G. Patching

Prof. Simon G. Patching

School of Biomedical Sciences, University of Leeds, Leeds, UK
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Research Focus & Metrics

Academic Career Length

28Years (1999-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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31 October 2008 in Science
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Journal Article
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SWSimone Weyand
Simone Weyand
TSTatsuro Shimamura
Tatsuro Shimamura
SYShunsuke Yajima
Shunsuke Yajima
SSShun'IChi Suzuki
Shun'IChi Suzuki
OMOsman Mirza
Osman Mirza
ACAlexander Cameron
Alexander Cameron
The nucleobase–cation–symport-1 (NCS1) transporters are essential components of salvage pathways for nucleobases and related metabolites. Here, we report the 2.85-angstrom resolution structure of the NCS1 benzyl-hydantoin transporter, Mhp1, from Microbacterium liquefaciens. Mhp1 contains 12 transmembrane helices, 10 of which are arranged in two inverted repeats of five helices. The structures of the outward-facing open and substrate-bound occluded conformations were solved, showing how the outward-facing cavity closes upon binding of substrate. Comparisons with the leucine transporter LeuT Aa and the galactose transporter vSGLT reveal that the outward- and inward-facing cavities are symmetrically arranged on opposite sides of the membrane. The reciprocal opening and closing of these cavities is synchronized by the inverted repeat helices 3 and 8, providing the structural basis of the alternating access model for membrane transport.


25 November 2013 in Proceedings of the National Academy of Sciences
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Journal Article
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KHKarl Hassan
Karl Hassan
SJScott M. Jackson
Scott M. Jackson
APAnahit Penesyan
Anahit Penesyan
Simon G. PatchingSimon G. Patching
Simon G. Patching
STSasha Tetu
Sasha Tetu
Ian PaulsenIan Paulsen
Ian Paulsen
Significance: Drug resistance is an increasing problem in clinical settings with some bacterial pathogens now resistant to virtually all available drugs. Chlorhexidine is a commonly used antiseptic and disinfectant in hospital environments, and there is increasing resistance to chlorhexidine seen in some pathogenic bacteria, such asAcinetobacter baumannii. This paper examines the global gene expression ofA. baumanniiin response to chlorhexidine exposure and identifies a gene that we demonstrate to mediate chlorhexidine resistance. Biochemical investigation reveals that this gene encodes a previously uncharacterized type of drug efflux pump that actively transports chlorhexidine out of the cell.

27 January 2022 in Microorganisms
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Journal Article
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Sahaya David NadarSahaya David Nadar
Sahaya David Nadar
Tabassum KhanTabassum Khan
Tabassum Khan
Simon G. PatchingSimon G. Patching
Simon G. Patching
Abdelwahab OmriAbdelwahab Omri
Abdelwahab Omri
A biofilm is a community of stable microorganisms encapsulated in an extracellular matrix produced by themselves. Many types of microorganisms that are found on living hosts or in the environment can form biofilms. These include pathogenic bacteria that can serve as a reservoir for persistent infections, and are culpable for leading to a broad spectrum of chronic illnesses and emergence of antibiotic resistance making them difficult to be treated. The absence of biofilm-targeting antibiotics in the drug discovery pipeline indicates an unmet opportunity for designing new biofilm inhibitors as antimicrobial agents using various strategies and targeting distinct stages of biofilm formation. The strategies available to control biofilm formation include targeting the enzymes and proteins specific to the microorganism and those involved in the adhesion pathways leading to formation of resistant biofilms. This review primarily focuses on the recent strategies and advances responsible for identifying a myriad of antibiofilm agents and their mechanism of biofilm inhibition, including extracellular polymeric substance synthesis inhibitors, adhesion inhibitors, quorum sensing inhibitors, efflux pump inhibitors, and cyclic diguanylate inhibitors. Furthermore, we present the structure–activity relationships (SAR) of these agents, including recently discovered biofilm inhibitors, nature-derived bioactive scaffolds, synthetic small molecules, antimicrobial peptides, bioactive compounds isolated from fungi, non-proteinogenic amino acids and antibiotics. We hope to fuel interest and focus research efforts on the development of agents targeting the uniquely complex, physical and chemical heterogeneous biofilms through a multipronged approach and combinatorial therapeutics for a more effective control and management of biofilms across diseases.

1 April 2018 in Protein Expression and Purification
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Journal Article
Closed access
IAIrshad Ahmad
Irshad Ahmad
NNNighat Nawaz
Nighat Nawaz
NDNizam M. Darwesh
Nizam M. Darwesh
SRSadeeq Ur Rahman
Sadeeq Ur Rahman
MMMohammad Z. Mustafa
Mohammad Z. Mustafa
Simon G. PatchingSimon G. Patching
Simon G. Patching