Irina L. Derkatch

Dr. Irina L. Derkatch

Department of Pharmacology, University of Nevada, Reno, NV, USA
orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 June 2015 in Cell Reports
Verified
Journal Article
Open access
JSJoseph S. Stephan
Joseph S. Stephan
LFLuana Fioriti
Luana Fioriti
NLNayan Lamba
Nayan Lamba
LCLuca Colnaghi
Luca Colnaghi
KKKevin Karl
Kevin Karl
EKEric R. Kandel
Eric R. Kandel
The mouse cytoplasmic polyadenylation element-binding protein 3 (CPEB3) is a translational regulator implicated in long-term memory maintenance. Invertebrate orthologs of CPEB3 in Aplysia and Drosophila are functional prions that are physiologically active in the aggregated state. To determine if this principle applies to the mammalian CPEB3, we expressed it in yeast and found that it forms heritable aggregates that are the hallmark of known prions. In addition, we confirm in the mouse the importance of CPEB3's prion formation for CPEB3 function. Interestingly, deletion analysis of the CPEB3 prion domain uncovered a tripartite organization: two aggregation-promoting domains surround a regulatory module that affects interaction with the actin cytoskeleton. In all, our data provide direct evidence that CPEB3 is a functional prion in the mammalian brain and underline the potential importance of an actin/CPEB3 feedback loop for the synaptic plasticity underlying the persistence of long-term memory.

1 July 2014 in Molecular Cell
Verified
Journal Article
Closed access
XLXiang Li
Xiang Li
JRJoseph B. Rayman
Joseph B. Rayman
EKEric R. Kandel
Eric R. Kandel
IDIrina L. Derkatch
Irina L. Derkatch

3 May 2016 in Prion
Verified
Journal Article
Open access
Anton NizhnikovAnton Nizhnikov
Anton Nizhnikov
KAKirill Antonets
Kirill Antonets
SBStanislav Bondarev
Stanislav Bondarev
SISergey G. Inge-Vechtomov
Sergey G. Inge-Vechtomov
IDIrina L. Derkatch
Irina L. Derkatch
Amyloids are protein aggregates consisting of fibrils rich in β-sheets. Growth of amyloid fibrils occurs by the addition of protein molecules to the tip of an aggregate with a concurrent change of a conformation. Thus, amyloids are self-propagating protein conformations. In certain cases these conformations are transmissible / infectious; they are known as prions. Initially, amyloids were discovered as pathological extracellular deposits occurring in different tissues and organs. To date, amyloids and prions have been associated with over 30 incurable diseases in humans and animals. However, a number of recent studies demonstrate that amyloids are also functionally involved in a variety of biological processes, from biofilm formation by bacteria, to long-term memory in animals. Interestingly, amyloid-forming proteins are highly overrepresented among cellular factors engaged in all stages of mRNA life cycle: from transcription and translation, to storage and degradation. Here we review rapidly accumulating data on functional and pathogenic amyloids associated with mRNA processing, and discuss possible significance of prion and amyloid networks in the modulation of key cellular functions.

1 November 2019 in Mycoses
Verified
Journal Article
Open access
PDF file
JBJeffry Bulson
Jeffry Bulson
DLDionysios Liveris
Dionysios Liveris
IDIrina L. Derkatch
Irina L. Derkatch
GFGary Friedman
Gary Friedman
JGJan Geliebter
Jan Geliebter
RTRaj K. Tiwari
Raj K. Tiwari
Summary: Background: Onychomycosis affects almost 6% of the world population. Topical azoles and systemic antifungal agents are of low efficacy and can have undesirable side effects. An effective, non‐invasive therapy for onychomycosis is an unmet clinical need.Objective: Determine the efficacy threshold of non‐thermal atmospheric plasma (NTAP) to treat onychomycosis in an in vitro model.Methods: A novel toe/nail‐plate model using cadaver nails and agarose media inoculated with Candida albicans was exposed to a range of NTAP doses.Results: Direct exposure of C albicans and Trichophyton mentagrophytes to 12 minutes of NTAP results in complete killing at doses of 39 and 15 kPulses, respectively. Onset of reduced viability of C albicans to NTAP treatment through the nail plate occurs at 64 kPulses with 10× and 100× reduction at 212 and 550 kPulses, respectively.Conclusions: NTAP is an effective, non‐invasive therapeutic approach to onychomycosis that should be evaluated in a clinical setting.

4 May 2014 in Prion
Verified
Journal Article
Closed access
Anton NizhnikovAnton Nizhnikov
Anton Nizhnikov
KAKirill Antonets
Kirill Antonets
SISergey G Inge-Vechtomov
Sergey G Inge-Vechtomov
IDIrina L. Derkatch
Irina L. Derkatch
Nonsense suppression is a readthrough of premature termination codons. It typically occurs either due to the recognition of stop codons by tRNAs with mutant anticodons, or due to a decrease in the fidelity of translation termination. In the latter case, suppressors usually promote the readthrough of different types of nonsense codons and are thus called omnipotent nonsense suppressors. Omnipotent nonsense suppressors were identified in yeast Saccharomyces cerevisiae in 1960s, and most of subsequent studies were performed in this model organism. Initially, omnipotent suppressors were localized by genetic analysis to different protein- and RNA-encoding genes, mostly the components of translational machinery. Later, nonsense suppression was found to be caused not only by genomic mutations, but also by epigenetic elements, prions. Prions are self-perpetuating protein conformations usually manifested by infectious protein aggregates. Modulation of translational accuracy by prions reflects changes in the activi...

3 January 2023 in Cancers
Verified
Journal Article
Open access
PDF file
SLSusan Liebman
Susan Liebman
IDIrina L. Derkatch
Irina L. Derkatch
SPSangeun Park
Sangeun Park
SPSei-Kyoung Park
Sei-Kyoung Park
The p53 tumor suppressor is a central protein in the fight against cancer