Milka Doktorova

Dr. Milka Doktorova

Molecular Physiology and Biological Physics, University of Virginia, Charlottesville, Virginia, USA

Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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25 August 2020 in Proceedings of the National Academy of Sciences
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SCSaptarshi Chakraborty
Saptarshi Chakraborty
MDMilka Doktorova
Milka Doktorova
TMTrivikram R. Molugu
Trivikram R. Molugu
FHFrederick Heberle
Frederick Heberle
HSHaden L. Scott
Haden L. Scott
RARana Ashkar
Rana Ashkar
Cholesterol is an integral component of eukaryotic cell membranes and a key molecule in controlling membrane fluidity, organization, and other physicochemical parameters. It also plays a regulatory function in antibiotic drug resistance and the immune response of cells against viruses, by stabilizing the membrane against structural damage. While it is well understood that, structurally, cholesterol exhibits a densification effect on fluid lipid membranes, its effects on membrane bending rigidity are assumed to be nonuniversal; i.e., cholesterol stiffens saturated lipid membranes, but has no stiffening effect on membranes populated by unsaturated lipids, such as 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC). This observation presents a clear challenge to structure–property relationships and to our understanding of cholesterol-mediated biological functions. Here, using a comprehensive approach—combining neutron spin-echo (NSE) spectroscopy, solid-state deuterium NMR (2H NMR) spectroscopy, and molecular dynamics (MD) simulations—we report that cholesterol locally increases the bending rigidity of DOPC membranes, similar to saturated membranes, by increasing the bilayer’s packing density. All three techniques, inherently sensitive to mesoscale bending fluctuations, show up to a threefold increase in effective bending rigidity with increasing cholesterol content approaching a mole fraction of 50%. Our observations are in good agreement with the known effects of cholesterol on the area-compressibility modulus and membrane structure, reaffirming membrane structure–property relationships. The current findings point to a scale-dependent manifestation of membrane properties, highlighting the need to reassess cholesterol’s role in controlling membrane bending rigidity over mesoscopic length and time scales of important biological functions, such as viral budding and lipid–protein interactions. Significance Cholesterol regulates critical cell functions, including lysis, viral budding, and antibiotic resistance, by modifying the bending rigidity of cell membranes; i.e., the ability of membranes to bend or withstand mechanical stresses. A molecular-level understanding of these functions requires knowledge of how cholesterol modifies membrane mechanics over relevant length and time scales. Currently, it is widely accepted that cholesterol has no effect on the mechanical properties of unsaturated lipid membranes, implying that viruses, for example, can bud from regions enriched in (poly)unsaturated lipids. Our observations that cholesterol causes local stiffening in DOPC membranes indicate that a reassessment of existing concepts is necessary. These findings have far-reaching implications in understanding cholesterol’s role in biology and its applications in bioengineering and drug design.

16 November 2020 in Nature Chemical Biology
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MDMilka Doktorova
Milka Doktorova
JSJessica L. Symons
Jessica L. Symons
ILIlya Levental
Ilya Levental

4 April 2025 in Cell
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Journal Article
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MDMilka Doktorova
Milka Doktorova
JSJessica L. Symons
Jessica L. Symons
XZXiaoxuan Zhang
Xiaoxuan Zhang
HWHong-Yin Wang
Hong-Yin Wang
JSJan Schlegel
Jan Schlegel
ILIlya Levental
Ilya Levental

6 September 2018 in Nature Protocols
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MDMilka Doktorova
Milka Doktorova
FHFrederick Heberle
Frederick Heberle
BEBarbara Eicher
Barbara Eicher
RSRobert F. Standaert
Robert F. Standaert
JKJohn Katsaras
John Katsaras
DMDrew Marquardt
Drew Marquardt
Freely suspended liposomes are widely used as model membranes for studying lipid–lipid and protein–lipid interactions. Liposomes prepared by conventional methods have chemically identical bilayer leaflets. By contrast, living cells actively maintain different lipid compositions in the two leaflets of the plasma membrane, resulting in asymmetric membrane properties that are critical for normal cell function. Here, we present a protocol for the preparation of unilamellar asymmetric phospholipid vesicles that better mimic biological membranes. Asymmetry is generated by methyl-β-cyclodextrin-catalyzed exchange of the outer leaflet lipids between vesicle pools of differing lipid composition. Lipid destined for the outer leaflet of the asymmetric vesicles is provided by heavy-donor multilamellar vesicles containing a dense sucrose core. Donor lipid is exchanged into extruded unilamellar acceptor vesicles that lack the sucrose core, facilitating the post-exchange separation of the donor and acceptor pools by centrifugation because of differences in vesicle size and density. We present two complementary assays allowing quantification of each leaflet’s lipid composition: the overall lipid composition is determined by gas chromatography–mass spectrometry, whereas the lipid distribution between the two leaflets is determined by NMR, using the lanthanide shift reagent Pr3+. The preparation protocol and the chromatographic assay can be applied to any type of phospholipid bilayer, whereas the NMR assay is specific to lipids with choline-containing headgroups, such as phosphatidylcholine and sphingomyelin. In ~12 h, the protocol can produce a large yield of asymmetric vesicles (up to 20 mg) suitable for a wide range of biophysical studies.

12 June 2017 in Physical Chemistry Chemical Physics
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MDMilka Doktorova
Milka Doktorova
DHDaniel Harries
Daniel Harries
GKGeorge Kheashvili
George Kheashvili
Computational methodology that allows to extract bending rigidity and tilt modulus for a wide range of single and multi-component lipid bilayers from real-space analysis of fluctuations in molecular dynamics simulations.

5 August 2020 in Proceedings of the National Academy of Sciences
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Journal Article
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FHFrederick Heberle
Frederick Heberle
MDMilka Doktorova
Milka Doktorova
HSHaden Scott
Haden Scott
ASAllison D. Skinkle
Allison D. Skinkle
MWM Neal Waxham
M Neal Waxham
ILIlya Levental
Ilya Levental
Significance: We have used cryogenic electron microscopy (cryo-EM) to achieve direct, probe-free imaging of lateral domains in biomimetic lipid membranes under native conditions and to characterize differences in their structures. First, measurements of membrane thickness in laterally uniform single-component membranes show that cryo-EM is capable of subangstrom resolution of interleaflet membrane thickness. All-atom simulations are used to predict the cryo-EM appearance of submicron domains in vesicles with coexisting liquid domains and these are quantitatively validated by direct imaging of phase-separated membranes. We then extend this approach to observe nanoscopic domains in isolated cellular membranes, demonstrating direct imaging of nanodomains in biomimetic and biological membranes.